Jatropha Genome Database

JcCA0142841.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142841.20 + phase: 0 /pseudo/partial
         (366 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g31850.1                                                       388   e-108
Glyma08g15130.1                                                       385   e-107
Glyma13g43960.1                                                       295   4e-80
Glyma10g09830.1                                                        80   2e-15

>Glyma05g31850.1 
          Length = 1029

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/249 (76%), Positives = 207/249 (83%), Gaps = 1/249 (0%)

Query: 118 ILKEYLEILLECAYCRTIETVEGGGXXXXXXXXXXXXXXXYTMVMDVHDRFRTESHSEAA 177
           +L+++ E L      RTIETVEGGG               YTMVMDVHDRFRTESHSEAA
Sbjct: 121 VLQDF-EALTPNLLARTIETVEGGGLVVLLLRSLSSLTRLYTMVMDVHDRFRTESHSEAA 179

Query: 178 GRFNERFLLSLASCKACVVMDDELNILPISSHMRSITPVPVKEDSEGLSEAERDLKNLKE 237
           GRFNERFLLSLASCKACVVMDDELNILPISSH+RSITPVPVKEDS+ LSEAE+DLKNLKE
Sbjct: 180 GRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSDELSEAEQDLKNLKE 239

Query: 238 QLHDDFPVGPLIKRCCTLDQGKAVITFLDAILDKTLRSTVALLAARGRGKSXXXXXXXXX 297
           QL++DFPVGPLIK+CCTLDQGKAV+TFLDAILDKTLRSTVALLAARGRGKS         
Sbjct: 240 QLNEDFPVGPLIKKCCTLDQGKAVVTFLDAILDKTLRSTVALLAARGRGKSAALGLSVAG 299

Query: 298 XXXXXYSNIFVTAPSPENLKTLFEFICKGFDVLEYKEHIDYDVVKSVNPEFKKATVRINV 357
                YSNIFVTAPSPENLKTLF+FIC+GF  L+YKEHID+DVVKS NPEFKKATVRIN+
Sbjct: 300 AIAVGYSNIFVTAPSPENLKTLFDFICEGFVALDYKEHIDFDVVKSANPEFKKATVRINI 359

Query: 358 YKQHRQTIQ 366
           YK HRQTIQ
Sbjct: 360 YKHHRQTIQ 368



 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 38/43 (88%)

Query: 1  MRKKVDERIRTLIENGVKLRHRSMFVIIGDKSRDQARHFHKIM 43
          MRKKVDERIRTLIENGV+ RHRSMF+IIGDKSRDQ  + H ++
Sbjct: 1  MRKKVDERIRTLIENGVRTRHRSMFIIIGDKSRDQIVNLHYML 43


>Glyma08g15130.1 
          Length = 1026

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/249 (76%), Positives = 204/249 (81%), Gaps = 1/249 (0%)

Query: 118 ILKEYLEILLECAYCRTIETVEGGGXXXXXXXXXXXXXXXYTMVMDVHDRFRTESHSEAA 177
           +L+++ E L      RTIETVEGGG                TMVMDVHDRFRTESH+EAA
Sbjct: 121 VLQDF-EALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLCTMVMDVHDRFRTESHNEAA 179

Query: 178 GRFNERFLLSLASCKACVVMDDELNILPISSHMRSITPVPVKEDSEGLSEAERDLKNLKE 237
           GRFNERFLLSLASCKACVVMDDELNILPISSH+RSITPVPVKEDS+ LSEAE+DLKNLKE
Sbjct: 180 GRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSDELSEAEQDLKNLKE 239

Query: 238 QLHDDFPVGPLIKRCCTLDQGKAVITFLDAILDKTLRSTVALLAARGRGKSXXXXXXXXX 297
           QL++DFPVGPLIK+CCTLDQGKAV+TFLD ILDKTLRSTVALLAARGRGKS         
Sbjct: 240 QLNEDFPVGPLIKKCCTLDQGKAVVTFLDVILDKTLRSTVALLAARGRGKSAALGLSVAG 299

Query: 298 XXXXXYSNIFVTAPSPENLKTLFEFICKGFDVLEYKEHIDYDVVKSVNPEFKKATVRINV 357
                YSNIFVTAPSPENLKTLF+FICKGFD L YKEHIDYDVVKS NPEFKK TVRIN+
Sbjct: 300 AIAVGYSNIFVTAPSPENLKTLFDFICKGFDALNYKEHIDYDVVKSANPEFKKGTVRINI 359

Query: 358 YKQHRQTIQ 366
           YK HRQTIQ
Sbjct: 360 YKHHRQTIQ 368



 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 38/43 (88%)

Query: 1  MRKKVDERIRTLIENGVKLRHRSMFVIIGDKSRDQARHFHKIM 43
          MRKKVDERIRTLIENGV+ RHRSMF+I+GDKSRDQ  + H ++
Sbjct: 1  MRKKVDERIRTLIENGVRTRHRSMFIIVGDKSRDQIVNLHYML 43


>Glyma13g43960.1 
          Length = 1013

 Score =  295 bits (756), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 162/252 (64%), Positives = 185/252 (73%), Gaps = 5/252 (1%)

Query: 118 ILKEYLEILLECAYCRTIETVEGGGXXXXXXXXXXXXXXXYTMVMDVHDRFRTESHSEAA 177
           IL+++ E L      RTIETVEGGG               YTMVMDVH RFRTESHSEAA
Sbjct: 121 ILQDF-ETLTPNLLARTIETVEGGGLIVLLLGSLSSLTSLYTMVMDVHKRFRTESHSEAA 179

Query: 178 GRFNERFLLSLASCKACVVMDDELNILPISSHMRSITPVPVKEDSEGLSEAERDLKNLKE 237
           GRFNERFLLS+ASCKAC+VMDDE+NILPISSH+RSITPV V ED+EGLS+A++ LK LKE
Sbjct: 180 GRFNERFLLSIASCKACLVMDDEMNILPISSHIRSITPVLVNEDAEGLSKAKQGLKKLKE 239

Query: 238 QLHDDFPVGPLIKRCCTLDQGKAVITFLDAILDKTLRSTVALLAARGRGKSXXXXXXXXX 297
           QL +++ VG LI++CCTLDQG AV+TFLDAIL KTLR TVALLA RG GKS         
Sbjct: 240 QLSENYLVG-LIRKCCTLDQGHAVVTFLDAILSKTLRGTVALLAGRGCGKSAALGLSIAG 298

Query: 298 XXXXXYSNIFVTAPSPENLKTLFEFICKGFDVLEYKEHID-YDVVKSVNPEFKKATVRIN 356
                YSNIFVTAPSP+NLKTLFEFI KGF+ L+YK  +  Y  +  V PEF K TVRIN
Sbjct: 299 AIAAGYSNIFVTAPSPDNLKTLFEFILKGFEALDYKLTVSVYLKLVYVKPEFGKNTVRIN 358

Query: 357 VYK--QHRQTIQ 366
           +YK   H QTIQ
Sbjct: 359 IYKHEHHIQTIQ 370



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 1  MRKKVDERIRTLIENGVKLRHRSMFVIIGDKSRDQARHFHKIM 43
          MRK++DERIRTLIENGVK RHRSMFVIIGDKS DQ  + H ++
Sbjct: 1  MRKRIDERIRTLIENGVKTRHRSMFVIIGDKSLDQIVNLHYML 43


>Glyma10g09830.1 
          Length = 140

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 47/73 (64%)

Query: 254 TLDQGKAVITFLDAILDKTLRSTVALLAARGRGKSXXXXXXXXXXXXXXYSNIFVTAPSP 313
           T+     V+TFLDAIL KTL  T+ALLA RG GKS              YSNIFVTAP+P
Sbjct: 38  TMLNCHVVVTFLDAILSKTLCGTLALLAGRGCGKSAALGLSIVGAIVVGYSNIFVTAPNP 97

Query: 314 ENLKTLFEFICKG 326
           +NLKTLFEFI K 
Sbjct: 98  DNLKTLFEFILKA 110