Jatropha Genome Database

JcCA0142191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142191.20 - phase: 0 /pseudo/partial
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g24040.1                                                        75   2e-14
Glyma03g23890.1                                                        73   6e-14
Glyma03g24050.1                                                        69   8e-13
Glyma03g24020.1                                                        69   1e-12
Glyma07g12440.1                                                        66   9e-12
Glyma10g43400.1                                                        64   4e-11
Glyma18g53600.1                                                        62   1e-10
Glyma03g24060.1                                                        61   3e-10
Glyma1009s00200.1                                                      60   7e-10
Glyma08g25530.1                                                        59   2e-09
Glyma20g23440.1                                                        57   6e-09

>Glyma03g24040.1 
          Length = 343

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/52 (63%), Positives = 44/52 (84%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ E I+P I+EGK+VYVEDIA+G+E+GPAA+VG++ G N GKQVV VA +
Sbjct: 292 PKFLEFILPHIREGKVVYVEDIAEGLENGPAALVGLYSGRNFGKQVVVVAHD 343


>Glyma03g23890.1 
          Length = 343

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 45/52 (86%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ E ++P I+EGK+VYVEDIA+G+E+GP+A+VG+F G N+GKQV+ V+ E
Sbjct: 292 PKFLEFLLPNIREGKVVYVEDIAEGLENGPSALVGLFSGRNVGKQVLVVSHE 343


>Glyma03g24050.1 
          Length = 342

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 42/50 (84%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVA 107
           PK+ E ++P I+EGK+VYVEDIA+G+E GPAA+VG++ G N+GKQVV V 
Sbjct: 291 PKFLEFVLPHIREGKVVYVEDIAEGLEKGPAALVGLYTGRNVGKQVVVVT 340


>Glyma03g24020.1 
          Length = 343

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 44/52 (84%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ E ++P I+E K+VYVEDIA+G+E+GPAA+VG++ G N+GKQVV VA +
Sbjct: 292 PKFLEFVLPHIRERKVVYVEDIAEGLENGPAALVGLYSGRNVGKQVVVVARD 343


>Glyma07g12440.1 
          Length = 238

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 40/45 (88%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQ 102
           PK+ + ++P I+EGK++YVEDIA+G+E+GPAA+VG+F G N+GKQ
Sbjct: 194 PKFLDFVLPHIREGKVLYVEDIAEGLENGPAALVGLFSGRNVGKQ 238


>Glyma10g43400.1 
          Length = 254

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 42/52 (80%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ + ++P I+EGKI YVEDIA+G+E+GPAA+  +F+G + GKQVV +A E
Sbjct: 203 PKFLDTVLPYIREGKITYVEDIAEGLENGPAALEAMFQGRSAGKQVVILAHE 254


>Glyma18g53600.1 
          Length = 348

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 40/52 (76%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           P++ E +    K+GKIVY+ED+ +G+ES PAA VG+F G N+GKQV++VA E
Sbjct: 297 PRFLEDVSSYYKQGKIVYIEDMNEGLESAPAAFVGLFHGKNVGKQVIRVAHE 348


>Glyma03g24060.1 
          Length = 346

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 42/52 (80%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ ++++P+I+EGKI  +EDI +G+E+GP A++ VF G  +GKQVV VA+E
Sbjct: 295 PKFLDLLLPQIREGKISCLEDIVEGLENGPHALIRVFSGHAIGKQVVSVANE 346


>Glyma1009s00200.1 
          Length = 220

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 36/45 (80%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQ 102
           PK+ E ++P I+E K+VYVEDIA+G+E+GPAA+VG++ G N+   
Sbjct: 102 PKFLEFVLPHIRERKVVYVEDIAEGLENGPAALVGLYSGRNVANN 146


>Glyma08g25530.1 
          Length = 173

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 39/50 (78%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVA 107
           PK+ + ++P I+EGKI YVEDI +G+E+GP A+  +F+G + GKQV+ +A
Sbjct: 123 PKFLDTVLPYIREGKITYVEDITEGLENGPIALEAMFQGRSAGKQVIILA 172


>Glyma20g23440.1 
          Length = 102

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 37/45 (82%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQ 102
           PK+ ++++P ++EGKI YVEDIA+G+++GPAA+  +F G + GKQ
Sbjct: 58  PKFLDIVLPYMREGKITYVEDIAEGLKNGPAALEAMFEGRSAGKQ 102