Jatropha Genome Database

JcCA0141021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0141021.10 - phase: 0 
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g34300.1                                                       101   2e-22
Glyma19g36990.1                                                       100   8e-22
Glyma19g36990.2                                                       100   8e-22
Glyma13g20930.1                                                        93   6e-20
Glyma10g06740.1                                                        91   5e-19
Glyma13g41120.1                                                        51   3e-07
Glyma15g04290.1                                                        51   3e-07
Glyma15g04290.2                                                        51   4e-07

>Glyma03g34300.1 
          Length = 309

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 70/104 (67%), Gaps = 14/104 (13%)

Query: 1   MAMLSTSLAGPKSSYCAAPQFSGLRRSCPKLESTNSHSLSQSFLRHFNSQLRVP-SSRKP 59
           MA  STSLA        +  + GLRR C KL+S NS S S      F+  LR+  S  KP
Sbjct: 1   MAATSTSLA--------SQLYIGLRRPCLKLDSFNSQSFS-----LFDPNLRLSLSPPKP 47

Query: 60  SGHVVAMAGTGTFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 103
           S  V+AMAGTG FFVGGNWKCNGTK+SI+KLV+DLN+AKLE DV
Sbjct: 48  SRAVIAMAGTGKFFVGGNWKCNGTKDSISKLVADLNNAKLEPDV 91


>Glyma19g36990.1 
          Length = 309

 Score = 99.8 bits (247), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 14/104 (13%)

Query: 1   MAMLSTSLAGPKSSYCAAPQFSGLRRSCPKLESTNSHSLSQSFLRHFNSQLRVP-SSRKP 59
           MA  STSLA        +  + GLRR C KL+S NS S S      F+  LR+  S  +P
Sbjct: 1   MAATSTSLA--------SQLYIGLRRPCLKLDSFNSQSFSV-----FDPNLRLSLSPPRP 47

Query: 60  SGHVVAMAGTGTFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 103
           S  +VAMAGTG FFVGGNWKCNGTK+SI+KLV+DLN AKLE DV
Sbjct: 48  SRAIVAMAGTGKFFVGGNWKCNGTKDSISKLVADLNSAKLEPDV 91


>Glyma19g36990.2 
          Length = 306

 Score = 99.8 bits (247), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 14/104 (13%)

Query: 1   MAMLSTSLAGPKSSYCAAPQFSGLRRSCPKLESTNSHSLSQSFLRHFNSQLRVP-SSRKP 59
           MA  STSLA        +  + GLRR C KL+S NS S S      F+  LR+  S  +P
Sbjct: 1   MAATSTSLA--------SQLYIGLRRPCLKLDSFNSQSFSV-----FDPNLRLSLSPPRP 47

Query: 60  SGHVVAMAGTGTFFVGGNWKCNGTKESITKLVSDLNDAKLEADV 103
           S  +VAMAGTG FFVGGNWKCNGTK+SI+KLV+DLN AKLE DV
Sbjct: 48  SRAIVAMAGTGKFFVGGNWKCNGTKDSISKLVADLNSAKLEPDV 91


>Glyma13g20930.1 
          Length = 305

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 56/77 (72%), Gaps = 7/77 (9%)

Query: 34  TNSHSL-------SQSFLRHFNSQLRVPSSRKPSGHVVAMAGTGTFFVGGNWKCNGTKES 86
           +N HSL       S SF R+ +S L  PSS KPS  VVAMAG+G FFVGGNWKCNGTK+S
Sbjct: 11  SNLHSLNPQPFSSSLSFFRNVHSTLSFPSSSKPSRGVVAMAGSGKFFVGGNWKCNGTKDS 70

Query: 87  ITKLVSDLNDAKLEADV 103
           I+KLVSDLN A LE DV
Sbjct: 71  ISKLVSDLNSATLEPDV 87


>Glyma10g06740.1 
          Length = 304

 Score = 90.5 bits (223), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 8/80 (10%)

Query: 31  LESTNSHSL-------SQSFLRHFNSQLRVPSSRKPSGHVVAMAGTGTFFVGGNWKCNGT 83
           L S+N HSL       S SF R+ +S L  PSS KPS  VVAMAG+G FFVGGNWKCNGT
Sbjct: 8   LFSSNLHSLNSQPFSSSLSFFRNVHSTLSFPSS-KPSRGVVAMAGSGKFFVGGNWKCNGT 66

Query: 84  KESITKLVSDLNDAKLEADV 103
           K+SI KLVSDLN A LE+DV
Sbjct: 67  KDSIRKLVSDLNSATLESDV 86


>Glyma13g41120.1 
          Length = 246

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 72  FFVGGNWKCNGTKESITKLVSDLNDAKLEA-DVGERIFFLPCAVSFSGFHKNLL 124
           FFVGGNWKCNGT E + K+V+ LN+AK+   DV E +   P    F  F K+LL
Sbjct: 40  FFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFV--FLPFVKSLL 91


>Glyma15g04290.1 
          Length = 253

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 6/51 (11%)

Query: 72  FFVGGNWKCNGTKESITKLVSDLNDAKLEA-DVGERI-----FFLPCAVSF 116
           FFVGGNWKCNGT E + K+V+ LN+AK+   DV E +      FLP   S 
Sbjct: 5   FFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFVFLPVVKSL 55


>Glyma15g04290.2 
          Length = 191

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 6/51 (11%)

Query: 72  FFVGGNWKCNGTKESITKLVSDLNDAKLEA-DVGERI-----FFLPCAVSF 116
           FFVGGNWKCNGT E + K+V+ LN+AK+   DV E +      FLP   S 
Sbjct: 5   FFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFVFLPVVKSL 55