Jatropha Genome Database

JcCA0140011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140011.10 + phase: 1 /pseudo/partial
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02720.1                                                       203   1e-52
Glyma05g36820.1                                                       202   2e-52
Glyma01g43570.1                                                       187   6e-48
Glyma11g01900.1                                                       172   3e-43
Glyma16g34810.1                                                        65   5e-11
Glyma03g00310.1                                                        62   3e-10
Glyma13g10240.1                                                        58   6e-09
Glyma16g03440.1                                                        58   7e-09
Glyma18g45090.1                                                        52   4e-07

>Glyma08g02720.1 
          Length = 209

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 115/138 (83%), Gaps = 8/138 (5%)

Query: 76  QYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSS 135
           QY SV+NPN+A+FSHYDS+LQL+YSGSQVGFMFIPAG+IDAGRTQYMAATF+VQSFPLS+
Sbjct: 80  QYASVRNPNRAAFSHYDSSLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSA 139

Query: 136 SPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKA 195
            P     +GPT A G   G     N G RV PT+EIES++ MAGRV+VLH FTHHV AKA
Sbjct: 140 PP----RMGPTLANGDGVG----FNYGLRVEPTLEIESKLEMAGRVKVLHFFTHHVYAKA 191

Query: 196 GCRVAIAVSDGSVLGFHC 213
           GCRVAIAV+DGSVLGFHC
Sbjct: 192 GCRVAIAVTDGSVLGFHC 209


>Glyma05g36820.1 
          Length = 213

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 114/138 (82%), Gaps = 8/138 (5%)

Query: 76  QYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSS 135
           QY SV+NPN+A+F+HYDS+LQL+YSGSQVGFMFIPAG+IDAGRTQYMAATF+VQSFPLS 
Sbjct: 84  QYASVRNPNRAAFTHYDSSLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSV 143

Query: 136 SPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKA 195
            P     +GPT A G   G     N G RV PTMEIES++ MAGRV+VLH FTHHV AKA
Sbjct: 144 PP----RMGPTLANGDGVG----FNYGLRVEPTMEIESKLEMAGRVKVLHFFTHHVYAKA 195

Query: 196 GCRVAIAVSDGSVLGFHC 213
           GCRVAIAV+DGSVLGFHC
Sbjct: 196 GCRVAIAVTDGSVLGFHC 213


>Glyma01g43570.1 
          Length = 183

 Score =  187 bits (475), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 94/138 (68%), Positives = 106/138 (76%), Gaps = 19/138 (13%)

Query: 76  QYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSS 135
           QY SV+NPN+ +FSHYDS+LQLLY G QVGFMF+PAGKI AGRTQYMAATF VQSFPL  
Sbjct: 65  QYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAAGRTQYMAATFTVQSFPL-- 122

Query: 136 SPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKA 195
                  +GPT           SV+G   VGPTME+ESRI MAGRVRVLH+F+HHVEAKA
Sbjct: 123 ------GLGPT-----------SVDGPSSVGPTMEMESRIEMAGRVRVLHLFSHHVEAKA 165

Query: 196 GCRVAIAVSDGSVLGFHC 213
            CRVAIA++DGSVLGF C
Sbjct: 166 QCRVAIAINDGSVLGFRC 183


>Glyma11g01900.1 
          Length = 178

 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 88/138 (63%), Positives = 98/138 (71%), Gaps = 24/138 (17%)

Query: 76  QYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSS 135
           QY SV+NPN+ +FSHYDS+LQLLY G QVGFMF+PAG     RTQYMAATF VQSFPL  
Sbjct: 65  QYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAG-----RTQYMAATFTVQSFPLGL 119

Query: 136 SPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKA 195
            P                   P V+G   VGPTMEIESRI MAGRVRVLH+F+ HVEAKA
Sbjct: 120 GP-------------------PFVDGPSNVGPTMEIESRIEMAGRVRVLHLFSRHVEAKA 160

Query: 196 GCRVAIAVSDGSVLGFHC 213
            CRVAIA++DGSVLGF C
Sbjct: 161 QCRVAIAITDGSVLGFRC 178


>Glyma16g34810.1 
          Length = 192

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 21/136 (15%)

Query: 78  VSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSSSP 137
           VSVKNPNK  F + DST  L Y G  +G + IPAG+I +G T+    T  + +  L S+ 
Sbjct: 72  VSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLTLTIMADRLLSNS 131

Query: 138 DAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKAGC 197
               +V    A G LP                 + + + M+G+V +L     HV +   C
Sbjct: 132 QLLSDV----ASGTLP-----------------LNTFVMMSGKVSILGFIKVHVVSSTSC 170

Query: 198 RVAIAVSDGSVLGFHC 213
            V I +S+G+V    C
Sbjct: 171 NVPINLSNGTVGNQEC 186


>Glyma03g00310.1 
          Length = 192

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 78  VSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSSSP 137
           VSVKNPNK  F + DST  L Y G  +G + I AG+I +G T+    T  + +  L S+ 
Sbjct: 72  VSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMADRLLSNS 131

Query: 138 DAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKAGC 197
               +V      G LP                 + + + M+G+V +L     HV +   C
Sbjct: 132 QLLSDV----TSGTLP-----------------LNTFVRMSGKVSILGFIKVHVVSSTSC 170

Query: 198 RVAIAVSDGSVLGFHC 213
            VAI +S+G+V    C
Sbjct: 171 DVAINLSNGTVGNQEC 186


>Glyma13g10240.1 
          Length = 209

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 21/136 (15%)

Query: 78  VSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSSSP 137
           VSVKNPNK  F + DS   L Y G  +G + I AG+I +G T+    T  + +  L S+ 
Sbjct: 89  VSVKNPNKVGFQYSDSAAHLNYRGQLIGEVPISAGEISSGETKGFNLTHTIMADRLLSNS 148

Query: 138 DAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKAGC 197
               +V      G LP                 + + + M+G+V +L     HV +   C
Sbjct: 149 QLLSDV----TSGTLP-----------------LSTFVRMSGKVSILGFIKVHVVSSTSC 187

Query: 198 RVAIAVSDGSVLGFHC 213
            VAI +S+G+V    C
Sbjct: 188 DVAINLSNGTVGNQEC 203


>Glyma16g03440.1 
          Length = 219

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 21/136 (15%)

Query: 78  VSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSSSP 137
           VSVKNPN ASF + ++T  L Y G  VG    P G+  A RT  M  T  V +  + SSP
Sbjct: 99  VSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSP 158

Query: 138 DAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKAGC 197
           D   ++G     G+L               TM   SR+   G+V++L++   HV  K  C
Sbjct: 159 DFVTDLG----SGLL---------------TMSSFSRV--PGQVKILNLIKRHVVVKMNC 197

Query: 198 RVAIAVSDGSVLGFHC 213
                +S  ++    C
Sbjct: 198 TTTFNISTQAIKEQSC 213


>Glyma18g45090.1 
          Length = 201

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 78  VSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPLSSSP 137
           VSV NPNK  F++Y+S  QL Y G  +G   IP G I A   + + +T  V +  L S+ 
Sbjct: 79  VSVNNPNKLGFNYYNSYAQLNYRGQLIGEAPIPNGHILAEEIKGLNSTLTVMADRLVSNS 138

Query: 138 DAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEAKAGC 197
           +   +V    A G+LP                 + S + + G+V VL     +V + + C
Sbjct: 139 EVTKDV----ALGLLP-----------------LNSLVRIFGQVNVLGFIKFYVASTSSC 177

Query: 198 RVAIAVSDGSVLGFHC 213
              + +S+ +++   C
Sbjct: 178 DFTLNLSNRTIVDNKC 193