Jatropha Genome Database

JcCA0138571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0138571.10 + phase: 0 /pseudo/partial
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06470.1                                                       113   6e-26
Glyma13g20670.2                                                       112   2e-25
Glyma13g20670.1                                                       112   2e-25
Glyma03g34000.1                                                       103   5e-23
Glyma19g36750.2                                                        98   3e-21
Glyma19g36750.1                                                        91   3e-19

>Glyma10g06470.1 
          Length = 106

 Score =  113 bits (283), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 80/145 (55%), Gaps = 39/145 (26%)

Query: 1   MGFGFAIGTFGVLILGHATYSTIQSXRLWRRNFQDLQXMXVLFFFYLFICFPCLCLTVRI 60
           MG GF +G  G+LIL HA YSTIQ   L +   ++                P L + + +
Sbjct: 1   MGLGFVVGFLGLLILFHAAYSTIQYKGLLKITEEEF-------------SGPPLNVVIEV 47

Query: 61  YFCVDGCLGLCKISPFXXXXXXXXXXXXXXXFCFWAALTVPGKFRSIHPYSDENRIVSLP 120
                  LGL                     FC WAALTVPGKF SIHP+S+ENRIVSLP
Sbjct: 48  ------TLGLV--------------------FCMWAALTVPGKFLSIHPHSEENRIVSLP 81

Query: 121 ANMDFMVFNHRGKVFPSEMDMKLKH 145
           +N+DFM+FNHR KVFP EMD+KLKH
Sbjct: 82  SNVDFMIFNHRYKVFPVEMDVKLKH 106


>Glyma13g20670.2 
          Length = 106

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 79/145 (54%), Gaps = 39/145 (26%)

Query: 1   MGFGFAIGTFGVLILGHATYSTIQSXRLWRRNFQDLQXMXVLFFFYLFICFPCLCLTVRI 60
           MG GF +G  G+LIL HA YSTIQ   L +   ++                P L + + +
Sbjct: 1   MGLGFVVGFLGLLILFHAAYSTIQYRGLLKITEEEF-------------SGPPLNVVIEV 47

Query: 61  YFCVDGCLGLCKISPFXXXXXXXXXXXXXXXFCFWAALTVPGKFRSIHPYSDENRIVSLP 120
                  LGL                      C WAALTVPGKF SIHP+S+ENRIVSLP
Sbjct: 48  ------TLGLV--------------------LCMWAALTVPGKFLSIHPHSEENRIVSLP 81

Query: 121 ANMDFMVFNHRGKVFPSEMDMKLKH 145
           +N+DFM+FNHR KVFP EMD+KLKH
Sbjct: 82  SNLDFMIFNHRYKVFPVEMDVKLKH 106


>Glyma13g20670.1 
          Length = 106

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 79/145 (54%), Gaps = 39/145 (26%)

Query: 1   MGFGFAIGTFGVLILGHATYSTIQSXRLWRRNFQDLQXMXVLFFFYLFICFPCLCLTVRI 60
           MG GF +G  G+LIL HA YSTIQ   L +   ++                P L + + +
Sbjct: 1   MGLGFVVGFLGLLILFHAAYSTIQYRGLLKITEEEF-------------SGPPLNVVIEV 47

Query: 61  YFCVDGCLGLCKISPFXXXXXXXXXXXXXXXFCFWAALTVPGKFRSIHPYSDENRIVSLP 120
                  LGL                      C WAALTVPGKF SIHP+S+ENRIVSLP
Sbjct: 48  ------TLGLV--------------------LCMWAALTVPGKFLSIHPHSEENRIVSLP 81

Query: 121 ANMDFMVFNHRGKVFPSEMDMKLKH 145
           +N+DFM+FNHR KVFP EMD+KLKH
Sbjct: 82  SNLDFMIFNHRYKVFPVEMDVKLKH 106


>Glyma03g34000.1 
          Length = 106

 Score =  103 bits (258), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 75/145 (51%), Gaps = 39/145 (26%)

Query: 1   MGFGFAIGTFGVLILGHATYSTIQSXRLWRRNFQDLQXMXVLFFFYLFICFPCLCLTVRI 60
           MG    +G  G+LIL HA YSTIQ   + +   ++               F  L   V  
Sbjct: 1   MGLALTVGFLGLLILFHAAYSTIQYRGVLKITEEE---------------FSGLPFEV-- 43

Query: 61  YFCVDGCLGLCKISPFXXXXXXXXXXXXXXXFCFWAALTVPGKFRSIHPYSDENRIVSLP 120
              ++  LGL                      CFW ALT PGKF SIHP+S+ENRIVSLP
Sbjct: 44  --VIELFLGLL--------------------LCFWTALTAPGKFLSIHPHSEENRIVSLP 81

Query: 121 ANMDFMVFNHRGKVFPSEMDMKLKH 145
           AN DFM+FNHRGKVFP EMD+KL+ 
Sbjct: 82  ANPDFMIFNHRGKVFPVEMDLKLRQ 106


>Glyma19g36750.2 
          Length = 106

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 48/54 (88%)

Query: 92  FCFWAALTVPGKFRSIHPYSDENRIVSLPANMDFMVFNHRGKVFPSEMDMKLKH 145
            CFWAALT PGKF SIHP+S++NRIVSLPAN+DFM+FNHRGK FP EMD+KL+ 
Sbjct: 53  LCFWAALTAPGKFLSIHPHSEDNRIVSLPANLDFMIFNHRGKAFPVEMDLKLRQ 106


>Glyma19g36750.1 
          Length = 112

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 6/60 (10%)

Query: 92  FCFWAALTVPGKFRSIHPYSDEN------RIVSLPANMDFMVFNHRGKVFPSEMDMKLKH 145
            CFWAALT PGKF SIHP+S++N      RIVSLPAN+DFM+FNHRGK FP EMD+KL+ 
Sbjct: 53  LCFWAALTAPGKFLSIHPHSEDNSLFLECRIVSLPANLDFMIFNHRGKAFPVEMDLKLRQ 112