Jatropha Genome Database

JcCA0138521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0138521.10 - phase: 0 /partial
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30080.1                                                       365   e-101
Glyma19g32950.1                                                       360   e-100

>Glyma03g30080.1 
          Length = 433

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/235 (78%), Positives = 206/235 (87%)

Query: 9   LQRKQAIYSSLDETFKIQKETYRGQQYSQIYFARLHMMRTLLYSLVPHWKNHLTVCTILG 68
           ++R Q  Y+SLDE F+I KE Y+GQQYSQIYFARLH+MRTLLYSLVPHWK +  VCT+LG
Sbjct: 3   MERVQCAYASLDEAFEIGKEAYQGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLG 62

Query: 69  LEEGKECIIVGTLYKHMKLKPCILDEYSKERSAVPLVKPHNFMHPDDYLVLEDESGRVKL 128
           LEEGKEC+IVGTLYKHMKLKPCILDEYSKERS VPLVKPHNF+HPDD+LVLEDESGRVKL
Sbjct: 63  LEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKL 122

Query: 129 GGDMLSPSAYVTGVVVALHGKETSAGDFLVLDVLEAGLAPQIELPLQPREDKYVVFVSGL 188
            G ++ PS YVTG+VVAL GKET AGDFLV DVL+AGL PQIE PL+PREDKYVV VSGL
Sbjct: 123 SGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKPREDKYVVLVSGL 182

Query: 189 SLGSIRSNPLQFQLLVDHITGHLGDEQEQGIVAEIVHVVVAGNSVEIPVGLLNGQ 243
           S+GS  SNPLQFQLL+DHITGHLGDE+EQ I ++IV VV AGN VEIP  LLNGQ
Sbjct: 183 SVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVFAGNLVEIPRRLLNGQ 237


>Glyma19g32950.1 
          Length = 433

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/235 (77%), Positives = 206/235 (87%)

Query: 9   LQRKQAIYSSLDETFKIQKETYRGQQYSQIYFARLHMMRTLLYSLVPHWKNHLTVCTILG 68
           ++R Q  Y+SLDE F+I KETY+GQQYSQIYFARLH+MRTLLYSL+PHWK +  VCT+LG
Sbjct: 3   MERVQCAYASLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSPVCTVLG 62

Query: 69  LEEGKECIIVGTLYKHMKLKPCILDEYSKERSAVPLVKPHNFMHPDDYLVLEDESGRVKL 128
           LEEGKEC+IVGTLYKHMKLKPCILDEYSKERS VPLVKPHNF+HPDD+LVLEDESGRVKL
Sbjct: 63  LEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKL 122

Query: 129 GGDMLSPSAYVTGVVVALHGKETSAGDFLVLDVLEAGLAPQIELPLQPREDKYVVFVSGL 188
            G ++SPS YVTG+VVAL GKET AGDFLV DVL+AGL PQIE PL+ REDKYVV VSGL
Sbjct: 123 SGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDKYVVLVSGL 182

Query: 189 SLGSIRSNPLQFQLLVDHITGHLGDEQEQGIVAEIVHVVVAGNSVEIPVGLLNGQ 243
           S+GS  SNPLQFQLL+DHITGHLGDE+EQ I ++I  VV AGN +EIP  LLNGQ
Sbjct: 183 SVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIAQVVFAGNLIEIPHRLLNGQ 237