Jatropha Genome Database

JcCA0136621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136621.10 - phase: 0 /partial
         (264 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g12160.1                                                       256   2e-68
Glyma06g07450.1                                                       104   1e-22
Glyma16g25630.1                                                        90   3e-18

>Glyma06g12160.1 
          Length = 361

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 120/182 (65%), Positives = 142/182 (78%), Gaps = 1/182 (0%)

Query: 63  TISSTNWAPLGLIQAELFLPLTFPTGQTFRWKQTGPFQYTGTLGPHLISLKNHHENGNVY 122
           T  +  WAPL L + EL LPLTFPTGQTF WK T P QYTG +GPHLISLK H +NG+V 
Sbjct: 34  TAKARAWAPLSLTRHELSLPLTFPTGQTFLWKNTAPSQYTGVVGPHLISLK-HLQNGDVS 92

Query: 123 YHIHRSPSESAAKSALLDFLNIDISLTDMWAEFSVSDSRFSELARHLQGARVLRQDPLEC 182
           Y +H       A++ALLDFLN  +SL D+W  FS SD+RF+ELA HL GARVLRQDP EC
Sbjct: 93  YCLHSPSHSDTAETALLDFLNATVSLADLWKTFSASDARFAELAHHLSGARVLRQDPFEC 152

Query: 183 LIQFLCSSNNNIARITKMVDFISSLGEHLGNVEGFDFHEFPSLERLAMITEQQLREAGFG 242
           LIQFLCSSNNNI RITKMV+++SSLG H+G+V  F FH FPSLE+L+ ++EQQLR+AGFG
Sbjct: 153 LIQFLCSSNNNIGRITKMVNYVSSLGTHVGDVGEFQFHAFPSLEQLSSVSEQQLRDAGFG 212

Query: 243 YR 244
           YR
Sbjct: 213 YR 214


>Glyma06g07450.1 
          Length = 97

 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 66/106 (62%), Gaps = 12/106 (11%)

Query: 82  PLTFPTGQTFRWKQTGPFQYTGTLGPHLISLKNHHENGNVYYHIHRSPSESAAKSALL-D 140
           P TFPTGQTF  K T P QYT  +GPHLISLK          H+   P        L  D
Sbjct: 1   PFTFPTGQTFSGKNTTPSQYTD-VGPHLISLK----------HLSTPPPTPTTPKRLFSD 49

Query: 141 FLNIDISLTDMWAEFSVSDSRFSELARHLQGARVLRQDPLECLIQF 186
           FLN  ISL D+W  FS SD+RF+EL+ HL GARVLRQDP +CLIQF
Sbjct: 50  FLNATISLADLWQIFSASDARFAELSHHLSGARVLRQDPFKCLIQF 95


>Glyma16g25630.1 
          Length = 166

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 2/82 (2%)

Query: 79  LFLPLTFPTGQTFRWKQTGPFQYTGTLGPHLISLKNHHENGNVYYHIHRSPSESAAKSAL 138
           L +P TFPTGQT RW+ T P QYT  +GPHLISLK H +NG++ Y++H S      + AL
Sbjct: 21  LLMP-TFPTGQTSRWENTAPSQYTDVVGPHLISLK-HLQNGDISYYLHSSSHLDNIEKAL 78

Query: 139 LDFLNIDISLTDMWAEFSVSDS 160
           LDFLN  ISL D+W  FS  D+
Sbjct: 79  LDFLNATISLVDLWQTFSAFDA 100