Jatropha Genome Database

JcCA0136101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136101.10 + phase: 1 /pseudo/partial
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g18620.1                                                       226   2e-59
Glyma12g09750.1                                                       224   6e-59

>Glyma11g18620.1 
          Length = 350

 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/225 (49%), Positives = 146/225 (64%), Gaps = 8/225 (3%)

Query: 19  QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
           ++  +MGV+ER G  L+ TVLFFDS G  LG+ RK+MP A E  +W  G  S++PV+ET 
Sbjct: 123 KVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERVIWGFGDGSTIPVFETP 182

Query: 79  IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
           +GKIG  +CW+N+ PLLRT +YAKGVEIYCAP+ADSR++W++SM HIA+EGGCFVLSA+Q
Sbjct: 183 VGKIGAAICWENRMPLLRTAMYAKGVEIYCAPTADSRDVWQASMTHIALEGGCFVLSANQ 242

Query: 139 LCRR-DYP----LSFGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
            CRR DYP      F  +  D + D                 LAGPNY  E LISADLDL
Sbjct: 243 FCRRKDYPPPPEYVFAGTEEDLTPDSVVCAGGSVIISPSGAVLAGPNYDGEALISADLDL 302

Query: 194 SEINRAKTEFGAIGNNLKPDHVGWCASE--LNPI-LLATDIKIED 235
            EI RAK +F  +G+  +P+ +     +   NP+   +T  KIED
Sbjct: 303 GEIARAKFDFDVVGHYSRPEVLSLIVKDHPTNPVTFTSTSTKIED 347


>Glyma12g09750.1 
          Length = 350

 Score =  224 bits (571), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 111/225 (49%), Positives = 146/225 (64%), Gaps = 8/225 (3%)

Query: 19  QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
           ++  +MGV+ER G  L+ TVLFFDS G  LG+ RK+MP A E  +W  G  S++PV+ET 
Sbjct: 123 KVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERVIWGFGDGSTIPVFETP 182

Query: 79  IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
           +GKIG  +CW+N+ PLLRT +YAKGVEIYCAP+AD+R++W++SM HIA+EGGCFVLSA+Q
Sbjct: 183 VGKIGAAICWENRMPLLRTAMYAKGVEIYCAPTADARDVWQASMTHIALEGGCFVLSANQ 242

Query: 139 LC-RRDYP----LSFGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
            C RRDYP      F  +  D + D                 LAGPNY  E LISADLDL
Sbjct: 243 FCRRRDYPPPPEYVFAGTEVDLTPDSVVCAGGSVIISPLGAVLAGPNYDGEALISADLDL 302

Query: 194 SEINRAKTEFGAIGNNLKPDHVGWCASE--LNPI-LLATDIKIED 235
            EI RAK +F  +G+  +P+ +     +   NP+   +T  KIED
Sbjct: 303 GEIARAKFDFDVVGHYSRPEVLSLTVKDHPTNPVTFTSTSTKIED 347