Jatropha Genome Database

JcCA0135211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0135211.10 + phase: 2 /partial
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g08930.1                                                        82   1e-16
Glyma13g04130.1                                                        82   1e-16

>Glyma20g08930.1 
          Length = 395

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 41/43 (95%)

Query: 1   GSTIVGIGSPDPPQFIYDDEDYKDVFISEANFLTREPNQWYKE 43
           GSTIVGIGSPDPPQF+YDD++YKDVF+S+A FLTRE NQWY+E
Sbjct: 338 GSTIVGIGSPDPPQFVYDDDEYKDVFLSDAYFLTREANQWYQE 380


>Glyma13g04130.1 
          Length = 62

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 42/44 (95%)

Query: 1  GSTIVGIGSPDPPQFIYDDEDYKDVFISEANFLTREPNQWYKEP 44
          GSTIVG+GSPDPPQF+YDD++YKDVF+S+A FLTRE NQWY+EP
Sbjct: 4  GSTIVGVGSPDPPQFVYDDDEYKDVFLSDAYFLTREENQWYQEP 47