Jatropha Genome Database

JcCA0134961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0134961.10 - phase: 0 /partial
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g07140.1                                                       271   2e-73
Glyma19g23580.1                                                       212   2e-55

>Glyma16g07140.1 
          Length = 326

 Score =  271 bits (694), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/184 (72%), Positives = 153/184 (83%)

Query: 1   QLDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPEDNDLTRGVYER 60
           Q DGIRPF MPLM+LACTALERVPLTR K+IE+LMKKFNQDLVFCRAP+D++LT  V+ R
Sbjct: 141 QTDGIRPFTMPLMRLACTALERVPLTRSKVIENLMKKFNQDLVFCRAPDDDELTSYVHAR 200

Query: 61  QVEKIDPLLDWVKSEFGFKPVVHSSFFGGKQEEGLVKAIEDLLQKTDNFEXXXXXXXXXX 120
           QVEKIDPLL WV+SEFGFKPV+++SFFGGKQE+GLV AIE+LL+KTD+ E          
Sbjct: 201 QVEKIDPLLRWVESEFGFKPVLYTSFFGGKQEDGLVMAIENLLKKTDDCELAAIDAIAAS 260

Query: 121 XXXXXXXXGIFRGKLDIEEAIQLIRLEEDLQVDKWGLVEGGHDVDIADLRVQVSSAAVFL 180
                   G+ +GKL IEEAI+LIRLEED QVD+WGLVEGGHDVDIADLRVQVSSA VFL
Sbjct: 261 AHSLIIAIGMVQGKLQIEEAIELIRLEEDSQVDRWGLVEGGHDVDIADLRVQVSSAIVFL 320

Query: 181 GLSR 184
           GLSR
Sbjct: 321 GLSR 324


>Glyma19g23580.1 
          Length = 171

 Score =  212 bits (539), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/185 (63%), Positives = 132/185 (71%), Gaps = 16/185 (8%)

Query: 1   QLDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPEDNDLTRGVYER 60
           Q DGIRPF MPLM LACTALERVPLTR K+IE+LMKKFNQDLVFCRAP+DN+    +Y R
Sbjct: 2   QTDGIRPFTMPLMGLACTALERVPLTRSKVIENLMKKFNQDLVFCRAPDDNE---RLY-R 57

Query: 61  QVEKIDPLLDWVKSEFGFKPVVHSSFFGGKQEEGLVKAIEDLLQKTDNFEXXXXXXXXXX 120
           QVEKIDPLL WV+SEFGFKPVV+SSFFG KQE+GL+ AIE+LL+KTD+ E          
Sbjct: 58  QVEKIDPLLRWVESEFGFKPVVYSSFFGEKQEDGLLTAIENLLKKTDDCELAAIDAIAAS 117

Query: 121 XXXXXXXXGIFRGKLDIEEAIQLIRLEEDLQVDKWGLVEGGHDVDIADLRVQVSSAAVFL 180
                   G+ +GKL IEEAI+LIRLEED              V I   RVQVSSA VFL
Sbjct: 118 AHSLTLAIGMVQGKLQIEEAIELIRLEEDF------------SVLILCFRVQVSSAIVFL 165

Query: 181 GLSRT 185
           GLSR 
Sbjct: 166 GLSRC 170