Jatropha Genome Database

JcCA0134821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0134821.20 + phase: 2 /partial
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g37080.1                                                       522   e-148
Glyma14g35370.1                                                       520   e-148
Glyma15g06020.1                                                       486   e-137
Glyma06g10670.1                                                       473   e-134
Glyma02g37080.2                                                       356   1e-98
Glyma04g10840.1                                                       175   5e-44

>Glyma02g37080.1 
          Length = 532

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/262 (93%), Positives = 255/262 (97%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELA+RVDEALGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC
Sbjct: 270 YRELANRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 329

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH +WVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNK GRIT+
Sbjct: 330 SAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITV 389

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF
Sbjct: 390 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 449

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF
Sbjct: 450 FDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 509

Query: 241 IIAERLRKRRIKSQPSIAPISL 262
           IIAERLRK RI+SQ  +AP+ +
Sbjct: 510 IIAERLRKSRIRSQQPLAPLGV 531


>Glyma14g35370.1 
          Length = 403

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/262 (93%), Positives = 255/262 (97%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELA+RVDEALGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC
Sbjct: 142 YRELANRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 201

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH LWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELV+LIEILNPQNKPGRIT+
Sbjct: 202 SAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLIEILNPQNKPGRITV 261

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFD IRAEVRAF
Sbjct: 262 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDFIRAEVRAF 321

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF
Sbjct: 322 FDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 381

Query: 241 IIAERLRKRRIKSQPSIAPISL 262
           IIAERLRK RI+SQ  +AP+ +
Sbjct: 382 IIAERLRKSRIRSQQPLAPLGV 403


>Glyma15g06020.1 
          Length = 495

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 225/258 (87%), Positives = 245/258 (94%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELAHRVDEALGFM+ AGLT DHPIM+TT+FWTSHECLLLPYEQ+LTR DST+GL+YDC
Sbjct: 237 YRELAHRVDEALGFMNVAGLTADHPIMSTTDFWTSHECLLLPYEQALTREDSTTGLHYDC 296

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH LWVGERTRQLDGAHVEFLRGVANPLGIKVSDKM P+ELVKLI+ILNP+NKPGRIT+
Sbjct: 297 SAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMVPDELVKLIDILNPKNKPGRITV 356

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           I RMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAP GLKTR FD+IRAE+RAF
Sbjct: 357 IVRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAIRAELRAF 416

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVHDQEGS+PGGVHLEMTGQNVTEC+GGSRT+T+DDLSSRYHTHCDPRLNASQSLELAF
Sbjct: 417 FDVHDQEGSYPGGVHLEMTGQNVTECVGGSRTITYDDLSSRYHTHCDPRLNASQSLELAF 476

Query: 241 IIAERLRKRRIKSQPSIA 258
            IA+RLRKRR+ S  S+ 
Sbjct: 477 NIADRLRKRRLNSTRSLG 494


>Glyma06g10670.1 
          Length = 470

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 219/251 (87%), Positives = 234/251 (93%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y ELA R+DE LGFM+AAGLT+DHPIM TTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC
Sbjct: 219 YLELARRIDETLGFMAAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 278

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH LWVGERTRQLDGAHVEFLRG+ANPLGIKVSDK+DP EL++LIEILNPQNKPGRIT+
Sbjct: 279 SAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKIDPKELIRLIEILNPQNKPGRITV 338

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           ITRMGAEN R KLPHLIR VR AG IV WVSDPMHGNTIKAPCGLKTRPF SI  EV++F
Sbjct: 339 ITRMGAENTRAKLPHLIRGVRNAGLIVCWVSDPMHGNTIKAPCGLKTRPFHSIMEEVKSF 398

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVH+QEGSHPGGVHLEMTGQNVTECIGGS+ VTFDDLSSRY+THCDPRLNASQSLELAF
Sbjct: 399 FDVHEQEGSHPGGVHLEMTGQNVTECIGGSKMVTFDDLSSRYNTHCDPRLNASQSLELAF 458

Query: 241 IIAERLRKRRI 251
           II+ERL+K RI
Sbjct: 459 IISERLKKNRI 469


>Glyma02g37080.2 
          Length = 444

 Score =  356 bits (914), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 166/174 (95%), Positives = 171/174 (98%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELA+RVDEALGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC
Sbjct: 270 YRELANRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 329

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH +WVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNK GRIT+
Sbjct: 330 SAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITV 389

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 174
           ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR
Sbjct: 390 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 443


>Glyma04g10840.1 
          Length = 180

 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/93 (86%), Positives = 84/93 (90%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y ELAHR+D  LGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC
Sbjct: 82  YLELAHRIDNTLGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 141

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKV 93
           SAH LWVGERTRQLDGAHVEFLRGV  PL ++ 
Sbjct: 142 SAHMLWVGERTRQLDGAHVEFLRGVIIPLALRF 174