Jatropha Genome Database

JcCA0133161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0133161.10 + phase: 0 /partial
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36490.1                                                       254   8e-68
Glyma10g30980.1                                                       250   1e-66
Glyma14g16910.1                                                        66   4e-11

>Glyma20g36490.1 
          Length = 283

 Score =  254 bits (649), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 121/181 (66%), Positives = 138/181 (76%), Gaps = 2/181 (1%)

Query: 27  GRLWIHAASKVPEEETIKAMEDFYREIYALNGITDIKFPEHYPVSRXXXXXXXXXXXXXX 86
           GRLWIH+ASKVPEE TIKAME FY+EIYALNGI+DI+FP+HYPVSR              
Sbjct: 44  GRLWIHSASKVPEESTIKAMEYFYKEIYALNGISDIQFPQHYPVSRLLGCVEVVGCLTRD 103

Query: 87  XXASWEAIPVGARLEGQTDFCWLCEHPQKLLVPFEMRGYQRVYNLEKKIYEAAVRGLIPV 146
             A WE +P G RLE QTD+CWLCE PQKLL+PFEMRGYQ VYNLEKKIYEAAVRGL PV
Sbjct: 104 ELACWEMVPEGVRLEAQTDYCWLCEWPQKLLIPFEMRGYQGVYNLEKKIYEAAVRGLSPV 163

Query: 147 KGPMPVKFPLPNPRDPFSLRPGSVAMLPE--KASEVEKSSTLTXXXXXXXXXXTQFSKKD 204
             PMPVKFPLP+PR+PFSL+PGS++ L    KASEV+KSS+++          TQFSKKD
Sbjct: 164 NSPMPVKFPLPDPRNPFSLKPGSISALTSNLKASEVDKSSSISLAIAGAQTAATQFSKKD 223

Query: 205 Q 205
           Q
Sbjct: 224 Q 224


>Glyma10g30980.1 
          Length = 328

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/181 (65%), Positives = 138/181 (76%), Gaps = 2/181 (1%)

Query: 27  GRLWIHAASKVPEEETIKAMEDFYREIYALNGITDIKFPEHYPVSRXXXXXXXXXXXXXX 86
           GRLWIHAASKVPEE TIKAME FY+EIYALNGITDI+FP+HYPVSR              
Sbjct: 44  GRLWIHAASKVPEESTIKAMEYFYKEIYALNGITDIQFPQHYPVSRLLGCVEVVGCLTRD 103

Query: 87  XXASWEAIPVGARLEGQTDFCWLCEHPQKLLVPFEMRGYQRVYNLEKKIYEAAVRGLIPV 146
             A WE +P G R+E QTD+CWLCE PQKLL+PFEMRGYQ VYNLEKKIYEAAVRGL PV
Sbjct: 104 ELACWEMVPEGVRVEAQTDYCWLCERPQKLLIPFEMRGYQGVYNLEKKIYEAAVRGLSPV 163

Query: 147 KGPMPVKFPLPNPRDPFSLRPGSVAMLPE--KASEVEKSSTLTXXXXXXXXXXTQFSKKD 204
             P+PVKFPLP+P++PFSL+PGS++ L    KA+EV+KSS+++          TQFSKKD
Sbjct: 164 NSPLPVKFPLPDPQNPFSLKPGSISALTPNLKATEVDKSSSISLAIAGAQAAATQFSKKD 223

Query: 205 Q 205
           Q
Sbjct: 224 Q 224


>Glyma14g16910.1 
          Length = 58

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 43/53 (81%), Gaps = 2/53 (3%)

Query: 135 IYEAAVRGLIPVKGPMPVKFPLPNPRDPFSLRPGSVAMLP--EKASEVEKSST 185
           IYEA VRGL PV   +P+KFPL +PR+PFSL+PGS++ML    KA+EV+KSS+
Sbjct: 1   IYEAIVRGLSPVNSQLPMKFPLLDPRNPFSLKPGSISMLTLNLKATEVDKSSS 53