Jatropha Genome Database

JcCA0130881.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0130881.20 + phase: 0 /partial
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39910.3                                                       335   2e-92
Glyma14g39910.1                                                       335   2e-92
Glyma14g39910.2                                                       335   2e-92
Glyma04g02180.1                                                       329   1e-90
Glyma04g02180.2                                                       328   2e-90

>Glyma14g39910.3 
          Length = 744

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 185/203 (91%), Gaps = 2/203 (0%)

Query: 1   MGSLSAINGPLQYPIARRDESVVDDYHGVKVADPYRWLEDPDAEEVKDFVEKQVKLTESV 60
           MGSLSA+  P+QYP ARRD+SV+DD+HGVK+ADPYRWLE+P+AEEVK+FV+KQV LT+SV
Sbjct: 31  MGSLSALYQPIQYPTARRDDSVLDDFHGVKIADPYRWLENPEAEEVKEFVQKQVALTDSV 90

Query: 61  LKSCDVREKIREKITKLFDHPRYDAPFRRGD-KYFYFHNTGLQAQNVLYVQDSLDGEPEV 119
           L+ CD R K+ EKITKLFD+PRY+APFRRGD KYFYFHNTGLQAQ+VLYVQD+L+ E EV
Sbjct: 91  LQRCDCRPKLAEKITKLFDNPRYNAPFRRGDNKYFYFHNTGLQAQSVLYVQDTLEAEAEV 150

Query: 120 LLDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRVNDKKVEADTLSWGV 179
           LLDPNALSEDGTVSLNTLSVS+DA++LAYGLSSSGSDWVTI +MR+ DK V+ DTLSW V
Sbjct: 151 LLDPNALSEDGTVSLNTLSVSKDAEFLAYGLSSSGSDWVTINLMRIRDKTVQPDTLSW-V 209

Query: 180 KFSGIAWTHDSKGFFYSRYPPPK 202
           KFS I+WTHD+KGFFYSRYP PK
Sbjct: 210 KFSSISWTHDTKGFFYSRYPAPK 232


>Glyma14g39910.1 
          Length = 762

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 185/203 (91%), Gaps = 2/203 (0%)

Query: 1   MGSLSAINGPLQYPIARRDESVVDDYHGVKVADPYRWLEDPDAEEVKDFVEKQVKLTESV 60
           MGSLSA+  P+QYP ARRD+SV+DD+HGVK+ADPYRWLE+P+AEEVK+FV+KQV LT+SV
Sbjct: 31  MGSLSALYQPIQYPTARRDDSVLDDFHGVKIADPYRWLENPEAEEVKEFVQKQVALTDSV 90

Query: 61  LKSCDVREKIREKITKLFDHPRYDAPFRRGD-KYFYFHNTGLQAQNVLYVQDSLDGEPEV 119
           L+ CD R K+ EKITKLFD+PRY+APFRRGD KYFYFHNTGLQAQ+VLYVQD+L+ E EV
Sbjct: 91  LQRCDCRPKLAEKITKLFDNPRYNAPFRRGDNKYFYFHNTGLQAQSVLYVQDTLEAEAEV 150

Query: 120 LLDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRVNDKKVEADTLSWGV 179
           LLDPNALSEDGTVSLNTLSVS+DA++LAYGLSSSGSDWVTI +MR+ DK V+ DTLSW V
Sbjct: 151 LLDPNALSEDGTVSLNTLSVSKDAEFLAYGLSSSGSDWVTINLMRIRDKTVQPDTLSW-V 209

Query: 180 KFSGIAWTHDSKGFFYSRYPPPK 202
           KFS I+WTHD+KGFFYSRYP PK
Sbjct: 210 KFSSISWTHDTKGFFYSRYPAPK 232


>Glyma14g39910.2 
          Length = 754

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 185/203 (91%), Gaps = 2/203 (0%)

Query: 1   MGSLSAINGPLQYPIARRDESVVDDYHGVKVADPYRWLEDPDAEEVKDFVEKQVKLTESV 60
           MGSLSA+  P+QYP ARRD+SV+DD+HGVK+ADPYRWLE+P+AEEVK+FV+KQV LT+SV
Sbjct: 31  MGSLSALYQPIQYPTARRDDSVLDDFHGVKIADPYRWLENPEAEEVKEFVQKQVALTDSV 90

Query: 61  LKSCDVREKIREKITKLFDHPRYDAPFRRGD-KYFYFHNTGLQAQNVLYVQDSLDGEPEV 119
           L+ CD R K+ EKITKLFD+PRY+APFRRGD KYFYFHNTGLQAQ+VLYVQD+L+ E EV
Sbjct: 91  LQRCDCRPKLAEKITKLFDNPRYNAPFRRGDNKYFYFHNTGLQAQSVLYVQDTLEAEAEV 150

Query: 120 LLDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRVNDKKVEADTLSWGV 179
           LLDPNALSEDGTVSLNTLSVS+DA++LAYGLSSSGSDWVTI +MR+ DK V+ DTLSW V
Sbjct: 151 LLDPNALSEDGTVSLNTLSVSKDAEFLAYGLSSSGSDWVTINLMRIRDKTVQPDTLSW-V 209

Query: 180 KFSGIAWTHDSKGFFYSRYPPPK 202
           KFS I+WTHD+KGFFYSRYP PK
Sbjct: 210 KFSSISWTHDTKGFFYSRYPAPK 232


>Glyma04g02180.1 
          Length = 733

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 157/202 (77%), Positives = 175/202 (86%), Gaps = 5/202 (2%)

Query: 1   MGSLSAINGPLQYPIARRDESVVDDYHGVKVADPYRWLEDPDAEEVKDFVEKQVKLTESV 60
           M SL A+N    YP ARRD+SVV+DYHGVK+ADPYRWLEDPDAEEVK+FV KQV+LT+SV
Sbjct: 1   MASLCALN----YPPARRDDSVVEDYHGVKIADPYRWLEDPDAEEVKEFVAKQVQLTDSV 56

Query: 61  LKSCDVREKIREKITKLFDHPRYDAPFRRGDKYFYFHNTGLQAQNVLYVQDSLDGEPEVL 120
           L+ C+ R K+RE ITKLFDHPRYDAPFRR +KYFYFHNTGLQ QN+LYVQ+SL+GE E L
Sbjct: 57  LQKCETRGKLRETITKLFDHPRYDAPFRRANKYFYFHNTGLQPQNILYVQESLEGEAEAL 116

Query: 121 LDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRVNDKKVEADTLSWGVK 180
           LDPN  SEDGTVSL+TLSVSEDAKYLAY LSSSGSDW TIKVMR+ D+ VE DTLSW VK
Sbjct: 117 LDPNTFSEDGTVSLSTLSVSEDAKYLAYALSSSGSDWTTIKVMRIEDRNVEPDTLSW-VK 175

Query: 181 FSGIAWTHDSKGFFYSRYPPPK 202
           FS I+WTHD KGFFYSRYP PK
Sbjct: 176 FSSISWTHDGKGFFYSRYPAPK 197


>Glyma04g02180.2 
          Length = 727

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 157/202 (77%), Positives = 175/202 (86%), Gaps = 5/202 (2%)

Query: 1   MGSLSAINGPLQYPIARRDESVVDDYHGVKVADPYRWLEDPDAEEVKDFVEKQVKLTESV 60
           M SL A+N    YP ARRD+SVV+DYHGVK+ADPYRWLEDPDAEEVK+FV KQV+LT+SV
Sbjct: 1   MASLCALN----YPPARRDDSVVEDYHGVKIADPYRWLEDPDAEEVKEFVAKQVQLTDSV 56

Query: 61  LKSCDVREKIREKITKLFDHPRYDAPFRRGDKYFYFHNTGLQAQNVLYVQDSLDGEPEVL 120
           L+ C+ R K+RE ITKLFDHPRYDAPFRR +KYFYFHNTGLQ QN+LYVQ+SL+GE E L
Sbjct: 57  LQKCETRGKLRETITKLFDHPRYDAPFRRANKYFYFHNTGLQPQNILYVQESLEGEAEAL 116

Query: 121 LDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRVNDKKVEADTLSWGVK 180
           LDPN  SEDGTVSL+TLSVSEDAKYLAY LSSSGSDW TIKVMR+ D+ VE DTLSW VK
Sbjct: 117 LDPNTFSEDGTVSLSTLSVSEDAKYLAYALSSSGSDWTTIKVMRIEDRNVEPDTLSW-VK 175

Query: 181 FSGIAWTHDSKGFFYSRYPPPK 202
           FS I+WTHD KGFFYSRYP PK
Sbjct: 176 FSSISWTHDGKGFFYSRYPAPK 197