Jatropha Genome Database

JcCA0128181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0128181.10 - phase: 0 /partial
         (269 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44120.1                                                       269   2e-72
Glyma08g07860.2                                                       164   7e-41
Glyma08g07860.1                                                       164   7e-41
Glyma05g24630.1                                                       161   8e-40
Glyma03g22630.1                                                        66   4e-11
Glyma12g13850.1                                                        60   3e-09
Glyma18g42370.1                                                        55   7e-08

>Glyma02g44120.1 
          Length = 343

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 135/209 (64%), Positives = 167/209 (79%), Gaps = 11/209 (5%)

Query: 41  DFSAKIQSAIQSLTSITKIPSTILSAQDPASSLLHDSNVSTAISALLREPDSGAGDNNLC 100
           D   K+Q+AI+SL+SI  +PS  LS   P +SLL +  + + IS+LLR P+SGAGDNNLC
Sbjct: 13  DSPEKVQTAIESLSSI--VPS--LSITTP-TSLLSNPEIYSHISSLLRRPNSGAGDNNLC 67

Query: 101 RWFYDTFQSTSPQLQLVVLRFVPIIAGLYLSRVPLRKPLAGFEAVLLALYAHETTSRNGQ 160
           RW YDTFQS   +LQL+VLRF+P+IAG+YLSRV  RKP AGFEAVLLALYAHETTSR GQ
Sbjct: 68  RWLYDTFQSGVTELQLLVLRFLPVIAGVYLSRVADRKPQAGFEAVLLALYAHETTSRAGQ 127

Query: 161 AIAVNIPDLSNSSVYHETKETSKNN------ATDLNLAVISPSLEPHGTVRSTRRARIVG 214
           A++V IPDL+  S+YH+ K  + NN      +T+LN+AV+SPSLEPHGTVRSTRRARIVG
Sbjct: 128 AVSVTIPDLAQPSLYHDPKALTPNNNKNINSSTELNVAVVSPSLEPHGTVRSTRRARIVG 187

Query: 215 VALELYFSKLSLMPIGSKIDFCEFCELWG 243
           VALEL+++K+  MP+ SKIDFCEFC+LW 
Sbjct: 188 VALELFYAKIPHMPVSSKIDFCEFCKLWA 216


>Glyma08g07860.2 
          Length = 384

 Score =  164 bits (416), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 6/164 (3%)

Query: 97  NNLCRWFYDTFQSTSPQLQLVVLRFVPIIAGLYLSRVPLRKP--LAGFEAVLLALYAHET 154
           + LC W YDTF S+ P L+LVVL FVP+++GLYLSR+   +P  LAGFEAVLLALYA ET
Sbjct: 95  DPLCHWLYDTFLSSDPHLRLVVLSFVPLLSGLYLSRIHSPEPPSLAGFEAVLLALYAAET 154

Query: 155 TSRNGQAIAVNIPDLSNSSVYHETKETSKNNATDL----NLAVISPSLEPHGTVRSTRRA 210
            SRNG+ + V IPDLS+ S+YH      ++    L    ++ +ISP LEP   V+ST+RA
Sbjct: 155 KSRNGKPLVVTIPDLSHPSIYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRA 214

Query: 211 RIVGVALELYFSKLSLMPIGSKIDFCEFCELWGRSKMVKCTRKV 254
            IVGVAL  +FS++S MP  SK++FC+F   W  S    C  ++
Sbjct: 215 SIVGVALHSFFSQISHMPAWSKLEFCQFAAAWAGSAHCPCRNEL 258


>Glyma08g07860.1 
          Length = 384

 Score =  164 bits (416), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 6/164 (3%)

Query: 97  NNLCRWFYDTFQSTSPQLQLVVLRFVPIIAGLYLSRVPLRKP--LAGFEAVLLALYAHET 154
           + LC W YDTF S+ P L+LVVL FVP+++GLYLSR+   +P  LAGFEAVLLALYA ET
Sbjct: 95  DPLCHWLYDTFLSSDPHLRLVVLSFVPLLSGLYLSRIHSPEPPSLAGFEAVLLALYAAET 154

Query: 155 TSRNGQAIAVNIPDLSNSSVYHETKETSKNNATDL----NLAVISPSLEPHGTVRSTRRA 210
            SRNG+ + V IPDLS+ S+YH      ++    L    ++ +ISP LEP   V+ST+RA
Sbjct: 155 KSRNGKPLVVTIPDLSHPSIYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRA 214

Query: 211 RIVGVALELYFSKLSLMPIGSKIDFCEFCELWGRSKMVKCTRKV 254
            IVGVAL  +FS++S MP  SK++FC+F   W  S    C  ++
Sbjct: 215 SIVGVALHSFFSQISHMPAWSKLEFCQFAAAWAGSAHCPCRNEL 258


>Glyma05g24630.1 
          Length = 377

 Score =  161 bits (407), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 109/161 (67%), Gaps = 5/161 (3%)

Query: 99  LCRWFYDTFQSTSPQLQLVVLRFVPIIAGLYLSRVPLRKP--LAGFEAVLLALYAHETTS 156
           LC W YDTF S+ P L+LVVL FVP++AGLYLSR+   +P  LAGFEAVLLALYA ET S
Sbjct: 93  LCHWLYDTFLSSDPHLRLVVLSFVPLLAGLYLSRIHSPEPPSLAGFEAVLLALYAAETKS 152

Query: 157 RNGQAIAVNIPDLSNSSVYHET--KETSKNNATDLNLAVISPSLEPHGTVRSTRRARIVG 214
           RNG+ + V IPDLS+ S+YH    K  +    T  ++ +ISP LEP   V+ST+RA IVG
Sbjct: 153 RNGKPLVVTIPDLSHPSIYHAPLRKPQTLTLITPPSVGLISPPLEPQLGVKSTKRASIVG 212

Query: 215 VALELYFSKLSLMPIGSKIDFCEFCELW-GRSKMVKCTRKV 254
           VAL  +FS++S MP  SK+ FC+F   W G +    C  ++
Sbjct: 213 VALHSFFSQISHMPAWSKLHFCQFAAAWAGGASHCPCRNEL 253


>Glyma03g22630.1 
          Length = 111

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 119 LRFVPIIAGLYLSRVPLRKP--LAGFEAVLLALYAHETTSRNGQAIAVNIPDLSNSSVYH 176
           L F+  + G YLS +   +P  L GF+ VL A YA ET SR+G+ + V I D     +YH
Sbjct: 1   LSFILFLLGHYLSCIHSPEPPSLEGFKVVLSAFYATETKSRSGKLLVVTISD-----IYH 55

Query: 177 ETKETSKNNATDLNLAVISPSLEPHGTVRSTRRARIVGVALELYFSK 223
             K  +       ++ +ISP LE    V+ST+ A IVG+AL  +FS+
Sbjct: 56  TPKPLALTLTPPPSVGLISPPLEHQLNVKSTKPASIVGIALHSFFSQ 102


>Glyma12g13850.1 
          Length = 53

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 101 RWFYDTFQSTSPQLQLVVLRFVPIIAGLYLSRVPLRKP--LAGFEAVLL 147
            W YDTF S++P L LVVL F+P + GLYLSR+   +P  LAGFEA+LL
Sbjct: 4   HWLYDTFLSSNPHLHLVVLSFLPFLVGLYLSRIHSLEPPSLAGFEAILL 52


>Glyma18g42370.1 
          Length = 101

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 112 PQLQLVVLRFVPIIAGLYLSRVPLRK--PLAGFEAVLLALYAHETTSRNGQAIAVNIPDL 169
           P L  +V+ F+P++ GL LS +   +   LAGFE VLLALYA ET S NG+ + V IPD+
Sbjct: 1   PLLCSIVISFIPLLTGLVLSHIYSTELPSLAGFEIVLLALYAAETKSHNGKLLVVTIPDI 60