Jatropha Genome Database

JcCA0127871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0127871.10 + phase: 0 /partial
         (336 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g12990.1                                                       447   e-126
Glyma05g08000.1                                                       405   e-113
Glyma17g12990.2                                                       284   9e-77
Glyma13g35870.1                                                       139   5e-33
Glyma12g34620.1                                                       136   2e-32
Glyma03g05860.1                                                        56   4e-08
Glyma19g04510.1                                                        50   5e-06

>Glyma17g12990.1 
          Length = 516

 Score =  447 bits (1150), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 251/326 (76%), Gaps = 3/326 (0%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATFKLDYGLVYWNSRLEH 60
           KNYPRIKTIVNKVGTITNEFRVP+FEILAGE++M+TEVKQYGATF+LDY LVYWNSRLEH
Sbjct: 173 KNYPRIKTIVNKVGTITNEFRVPEFEILAGEHNMITEVKQYGATFRLDYRLVYWNSRLEH 232

Query: 61  EHMRLVSQFKPGETICDMFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDD 120
           EH RLVS F+ G+TICDMF GIGPFAIPAAQKGC+VYANDLNPDS  YLR+NAK+NKVDD
Sbjct: 233 EHKRLVSMFQAGQTICDMFTGIGPFAIPAAQKGCIVYANDLNPDSIHYLRINAKINKVDD 292

Query: 121 RIFPYSMDARKFISQLMAAPNHENDLES--EASALKACENHDLQGTEETKSAVDVKEAPD 178
           RI+ Y+MDARKFISQ+M  PN+E  LE+  E   L   +N +   +E     VD K+  D
Sbjct: 293 RIYAYNMDARKFISQMMEVPNNEVTLETSHEVPILDTRDNAE-SNSENELLTVDTKDLGD 351

Query: 179 TVPSDHEGTQDPCRKADTSVTAVKRPSHCFHEENENTHGGAISFTSRRKGSVNKRMRASE 238
           +  S  E  +   R   TSV A KR S  +HE N   HG  I    RRKGS NKRMR SE
Sbjct: 352 SNNSGLEDVKGSTRHTATSVIAGKRSSTSYHEGNGEAHGTDILEGCRRKGSTNKRMRGSE 411

Query: 239 LPNTKPWEHVDHVVMNLPASALQFLDAFRGVIKKKDWMGQLPWIHCYCFIRANQTEETII 298
           +  TK WEHVDHV+MNLPASA+QFLDAFRG+I+KK W G LPWIHCYCFIRA +T ETII
Sbjct: 412 ICVTKTWEHVDHVIMNLPASAVQFLDAFRGLIQKKYWKGCLPWIHCYCFIRATETPETII 471

Query: 299 SEAESALGACIQDPVFHRVREVAPNK 324
           + AESAL   IQD  FHRVR+VAPNK
Sbjct: 472 AVAESALNTRIQDSTFHRVRDVAPNK 497


>Glyma05g08000.1 
          Length = 464

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/326 (63%), Positives = 230/326 (70%), Gaps = 43/326 (13%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATFKLDYGLVYWNSRLEH 60
           KNYPRIKTIVNKVGTITNEFRVP+FEILAGE++M+TEVKQYGATF+LDY LVYWNSRLEH
Sbjct: 161 KNYPRIKTIVNKVGTITNEFRVPEFEILAGEHNMITEVKQYGATFRLDYSLVYWNSRLEH 220

Query: 61  EHMRLVSQFKPGETICDMFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDD 120
           EH RLVS F+ GETICDMFAGIGPFAIPAAQKGC+VYANDLNPDS  YLR+NAK+NKV D
Sbjct: 221 EHKRLVSMFQAGETICDMFAGIGPFAIPAAQKGCIVYANDLNPDSIHYLRINAKINKVGD 280

Query: 121 RIFPYSMDARKFISQLMAAPNHENDLES--EASALKACENHDLQGTEETKSAVDVKEAPD 178
            I+ Y+MDARKFISQ+M  PN E  LE+  E   L   +N +     E  +         
Sbjct: 281 CIYAYNMDARKFISQMMEVPNTEVTLENSHEVPILDTRDNAESNSKNELLTG-------- 332

Query: 179 TVPSDHEGTQDPCRKADTSVTAVKRPSHCFHEENENTHGGAISFTSRRKGSVNKRMRASE 238
                                            N   HG  I    RRKGS NKRMR SE
Sbjct: 333 ---------------------------------NGEAHGTDILEGGRRKGSANKRMRGSE 359

Query: 239 LPNTKPWEHVDHVVMNLPASALQFLDAFRGVIKKKDWMGQLPWIHCYCFIRANQTEETII 298
           +  TK WEHVDHV+MNLPASA+QFLDAFRG+I+KK W G LPWIHCYCFIRA +T ETII
Sbjct: 360 ISVTKTWEHVDHVIMNLPASAVQFLDAFRGLIQKKYWKGCLPWIHCYCFIRATETPETII 419

Query: 299 SEAESALGACIQDPVFHRVREVAPNK 324
           + AESAL A IQD  FHRVR+VAPNK
Sbjct: 420 AVAESALDAHIQDSRFHRVRDVAPNK 445


>Glyma17g12990.2 
          Length = 404

 Score =  284 bits (727), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 141/212 (66%), Positives = 163/212 (76%), Gaps = 3/212 (1%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATFKLDYGLVYWNSRLEH 60
           KNYPRIKTIVNKVGTITNEFRVP+FEILAGE++M+TEVKQYGATF+LDY LVYWNSRLEH
Sbjct: 173 KNYPRIKTIVNKVGTITNEFRVPEFEILAGEHNMITEVKQYGATFRLDYRLVYWNSRLEH 232

Query: 61  EHMRLVSQFKPGETICDMFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDD 120
           EH RLVS F+ G+TICDMF GIGPFAIPAAQKGC+VYANDLNPDS  YLR+NAK+NKVDD
Sbjct: 233 EHKRLVSMFQAGQTICDMFTGIGPFAIPAAQKGCIVYANDLNPDSIHYLRINAKINKVDD 292

Query: 121 RIFPYSMDARKFISQLMAAPNHENDLES--EASALKACENHDLQGTEETKSAVDVKEAPD 178
           RI+ Y+MDARKFISQ+M  PN+E  LE+  E   L   +N +   +E     VD K+  D
Sbjct: 293 RIYAYNMDARKFISQMMEVPNNEVTLETSHEVPILDTRDNAE-SNSENELLTVDTKDLGD 351

Query: 179 TVPSDHEGTQDPCRKADTSVTAVKRPSHCFHE 210
           +  S  E  +   R   TSV A KR S  +HE
Sbjct: 352 SNNSGLEDVKGSTRHTATSVIAGKRSSTSYHE 383


>Glyma13g35870.1 
          Length = 601

 Score =  139 bits (350), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 93/136 (68%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATFKLDYGLVYWNSRLEH 60
           KN PRI+T+VNK+ TI NE+R  + E+LAG + +VT V + G  F++D   VYW+SRL  
Sbjct: 357 KNKPRIQTVVNKIDTIQNEYRTMQLEVLAGNHSLVTTVVENGIHFQVDLATVYWSSRLGT 416

Query: 61  EHMRLVSQFKPGETICDMFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDD 120
           E  RL+S F   + +CD+F+G+GP AI AA+    V+ANDLNP + +YL  N  LNK+D 
Sbjct: 417 ERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAVEYLERNCVLNKLDR 476

Query: 121 RIFPYSMDARKFISQL 136
           +I  ++MD R+FI  +
Sbjct: 477 KIKVFNMDGRRFIKSM 492



 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 246 EHVDHVVMNLPASALQFLDAFRGVIKK--KDWMGQLPWIHCYCFIRANQTEETIISEAES 303
           + +  VVMNLP+ A +FLDAFRG+ K   KD    LP IH Y F +A   E         
Sbjct: 499 QSITQVVMNLPSEAAEFLDAFRGIYKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRI 558

Query: 304 ALGACIQDPVFHRVREVAPNK 324
           AL     +    RVR VAP K
Sbjct: 559 ALLEVAVNVDMRRVRLVAPGK 579


>Glyma12g34620.1 
          Length = 533

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 93/136 (68%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATFKLDYGLVYWNSRLEH 60
           KN PRI+T+VNK+ +I NE+R  + E+LAG + +VT V + G  F++D   VYW+SRL  
Sbjct: 288 KNKPRIQTVVNKIDSIQNEYRTMQLEVLAGNHSLVTTVVENGLRFQVDLATVYWSSRLGT 347

Query: 61  EHMRLVSQFKPGETICDMFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDD 120
           E  RL+S F   + +CD+F+G+GP AI AA+    V+ANDLNP + +YL  N  LNK++ 
Sbjct: 348 ERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAVEYLERNCVLNKLER 407

Query: 121 RIFPYSMDARKFISQL 136
           +I  ++MD R+FI  +
Sbjct: 408 KIKVFNMDGRRFIKAM 423



 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 246 EHVDHVVMNLPASALQFLDAFRGVIKK--KDWMGQLPWIHCYCFIRANQTEETIISEAES 303
           + +  VVMNLP+ A +FLDAFRG+ K   KD    LP IH Y F +A   E         
Sbjct: 430 QSITQVVMNLPSEAAEFLDAFRGIYKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRI 489

Query: 304 ALGACIQDPVFHRVREVAPNK 324
           AL     +    RVR VAP K
Sbjct: 490 ALLEVAVNVDMRRVRLVAPGK 510


>Glyma03g05860.1 
          Length = 117

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)

Query: 78  MFAGIGPFAIPAAQKGCVVYANDLNPDSFQYLRLNAKLNKVDDRIFPYSMDARKFISQLM 137
           +F+G+GP AI   +    V+ANDLNP + +YL  N  LNK++ +I  ++MD R+FI  + 
Sbjct: 1   VFSGVGPLAISVVRIVKRVFANDLNPYAVEYLERNCVLNKLERKIKVFNMDGRRFIKAMY 60

Query: 138 AAPNHEN------DLESEASALKACENHDLQGT 164
            +   ++      +  SEA+      N+++  +
Sbjct: 61  DSDISQSITQVVMNFPSEAAEFLGVNNYNILAS 93


>Glyma19g04510.1 
          Length = 378

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 32/45 (71%)

Query: 1   KNYPRIKTIVNKVGTITNEFRVPKFEILAGENDMVTEVKQYGATF 45
           KN PRI+T+VNK+ TI NE++  + E+LAG + +VT V + G  F
Sbjct: 163 KNKPRIQTVVNKIDTIQNEYKTMQLEVLAGNHSVVTTVVENGIRF 207