Jatropha Genome Database

JcCA0124371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0124371.10 - phase: 0 
         (95 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04290.1                                                       110   5e-25
Glyma10g06740.1                                                        89   1e-18
Glyma13g20930.1                                                        88   2e-18
Glyma03g34300.1                                                        88   2e-18
Glyma19g36990.1                                                        86   9e-18
Glyma19g36990.2                                                        77   6e-15

>Glyma15g04290.1 
          Length = 253

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPEFIEI 85
           VH +LRKW+ +N S EVA + RIIYGGSV   NCKELAAQPDVDGFLVGGASLKPEF++I
Sbjct: 185 VHADLRKWVHDNVSAEVAASVRIIYGGSVNGGNCKELAAQPDVDGFLVGGASLKPEFVDI 244

Query: 86  IKSAEVKKS 94
           I +A VKK+
Sbjct: 245 INAATVKKN 253


>Glyma10g06740.1 
          Length = 304

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIE 84
           VH  +R WLK+N S EV+  TRIIYGGSV A+N  ELA Q D+DGFLVGGASLK PEF  
Sbjct: 233 VHAAVRDWLKKNVSAEVSSKTRIIYGGSVNASNSAELAKQEDIDGFLVGGASLKGPEFAT 292

Query: 85  IIKSAEVKKSA 95
           II S   KK A
Sbjct: 293 IINSVTSKKVA 303


>Glyma13g20930.1 
          Length = 305

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIE 84
           VH  +R WLK+N S +VA  TRIIYGGSV A+N  ELA Q D+DGFLVGGASLK PEF  
Sbjct: 234 VHAAVRDWLKKNVSAKVASKTRIIYGGSVNASNSAELAKQEDIDGFLVGGASLKGPEFAT 293

Query: 85  IIKSAEVKKSA 95
           II S   KK A
Sbjct: 294 IINSVTSKKVA 304


>Glyma03g34300.1 
          Length = 309

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIE 84
           VH  +R WLK+N S EVA  TRIIYGGSV   N  ELA Q D+DGFLVGGASLK PEF  
Sbjct: 238 VHVAVRDWLKKNVSDEVASKTRIIYGGSVNGGNSAELAKQEDIDGFLVGGASLKGPEFAT 297

Query: 85  IIKSAEVKKSA 95
           I+ S   KK A
Sbjct: 298 IVNSVTSKKVA 308


>Glyma19g36990.1 
          Length = 309

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 48/71 (67%), Gaps = 1/71 (1%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIE 84
           VH  +R WLK+N   EVA  TRIIYGGSV   N  ELA Q D+DGFLVGGASLK PEF  
Sbjct: 238 VHVAVRDWLKKNVPDEVASKTRIIYGGSVNGGNSAELAKQEDIDGFLVGGASLKGPEFAT 297

Query: 85  IIKSAEVKKSA 95
           I+ S   KK A
Sbjct: 298 IVNSVTSKKVA 308


>Glyma19g36990.2 
          Length = 306

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 39/54 (72%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK 79
           VH  +R WLK+N   EVA  TRIIYGGSV   N  ELA Q D+DGFLVGGASLK
Sbjct: 238 VHVAVRDWLKKNVPDEVASKTRIIYGGSVNGGNSAELAKQEDIDGFLVGGASLK 291