Jatropha Genome Database

JcCA0122211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0122211.10 - phase: 0 
         (318 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g15900.1                                                       539   e-153
Glyma19g31730.1                                                       532   e-151
Glyma11g20840.1                                                       504   e-143
Glyma12g01380.1                                                       503   e-142
Glyma02g33340.1                                                       311   5e-85
Glyma03g28970.1                                                       309   3e-84
Glyma12g12510.1                                                        71   1e-12
Glyma02g34820.1                                                        67   2e-11
Glyma16g04990.2                                                        66   4e-11

>Glyma10g15900.1 
          Length = 458

 Score =  539 bits (1388), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/304 (85%), Positives = 273/304 (89%), Gaps = 1/304 (0%)

Query: 9   NVHQNGWSIQHGNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAALLQDSYGQFR 68
           N + NG S+Q  N LEEKLD+ R LLGKADGDPLRIV VGAGAWGSVFAALLQD+YGQFR
Sbjct: 6   NEYSNG-SVQGCNSLEEKLDDLRGLLGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFR 64

Query: 69  EKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADE 128
           +KVQIRIWRRPG+ VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTL ADE
Sbjct: 65  DKVQIRIWRRPGKTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADE 124

Query: 129 ILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKERITV 188
           ILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNG+PSTET E+FEEI  YWKERITV
Sbjct: 125 ILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISIYWKERITV 184

Query: 189 PIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARI 248
           P+IISLAKGIEAALEPVPHIITPT+MIN+ATG+ MENILYLGGPNIASEIYNKEYANARI
Sbjct: 185 PVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARI 244

Query: 249 CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFLAHIDYCSMA 308
           CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHE+MGGLKNVYAIGAG               
Sbjct: 245 CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEIMGGLKNVYAIGAGMVAALTNESATSKSV 304

Query: 309 YFQH 312
           YF H
Sbjct: 305 YFAH 308


>Glyma19g31730.1 
          Length = 465

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/317 (82%), Positives = 277/317 (87%), Gaps = 7/317 (2%)

Query: 1   MVGSIEAMNVHQNGWS-----IQHGNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSV 55
           MVGSI  M V  NG+S     +Q+ N +EEKLD  R L+GK DGDPLRIV VGAGAWGSV
Sbjct: 1   MVGSI--MGVVHNGYSNGSVGVQNCNGVEEKLDCLRRLIGKGDGDPLRIVSVGAGAWGSV 58

Query: 56  FAALLQDSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 115
           FAALLQD+YGQFR+K+QIRIWRR GRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV
Sbjct: 59  FAALLQDTYGQFRDKIQIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 118

Query: 116 EARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVF 175
           EARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNG+PSTET E+F
Sbjct: 119 EARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIF 178

Query: 176 EEIGHYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIA 235
           EEI  YWKERITVPIIISL+KGIEAALEPVPHIITPT+MIN+AT + MENILYLGGPNIA
Sbjct: 179 EEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQATRVPMENILYLGGPNIA 238

Query: 236 SEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKF 295
           SEIYNKEYANARICGAEKWRK LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG  
Sbjct: 239 SEIYNKEYANARICGAEKWRKALAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMV 298

Query: 296 FYFLAHIDYCSMAYFQH 312
                        YF H
Sbjct: 299 AALTNESATSKSVYFAH 315


>Glyma11g20840.1 
          Length = 462

 Score =  504 bits (1297), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/313 (78%), Positives = 265/313 (84%), Gaps = 3/313 (0%)

Query: 1   MVGSIEAMNVHQNGWSIQ-HGNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAAL 59
           MVGS    N H NG  +  +G  LEEK+DE R LLGK +GDPLRIVGVGAGAWGSVF A+
Sbjct: 1   MVGS--NGNAHSNGSLLNVNGGSLEEKVDEIRGLLGKVEGDPLRIVGVGAGAWGSVFIAM 58

Query: 60  LQDSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 119
           LQ++YG  REKV IRIWRRPGR VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL
Sbjct: 59  LQEAYGSLREKVLIRIWRRPGRMVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 118

Query: 120 GDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIG 179
           GDRTL+ADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIV+NG+PSTET EVFEEI 
Sbjct: 119 GDRTLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETREVFEEIS 178

Query: 180 HYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIY 239
            YWKERITVP+I+SLAKG+EA L   P IITPT MIN+ATG+ +++ILYLGGPNIASEIY
Sbjct: 179 KYWKERITVPVIVSLAKGVEAELGTEPRIITPTLMINQATGVPLDSILYLGGPNIASEIY 238

Query: 240 NKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFL 299
           NKEYANARICGAEKWRK LAKFLRQPHFIVWDN DLVTHE+MGGLKNVYAIGAG      
Sbjct: 239 NKEYANARICGAEKWRKTLAKFLRQPHFIVWDNGDLVTHEIMGGLKNVYAIGAGMVAALT 298

Query: 300 AHIDYCSMAYFQH 312
                    YF H
Sbjct: 299 NESATSKSVYFAH 311


>Glyma12g01380.1 
          Length = 465

 Score =  503 bits (1294), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 244/311 (78%), Positives = 258/311 (82%), Gaps = 11/311 (3%)

Query: 13  NGWSIQHGNC-----------LEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAALLQ 61
           NG ++ H  C           LEEKLDE R L+GK DGDPLRIVGVGAGAWGSVF A+LQ
Sbjct: 4   NGEAVTHSACSNGSVQTVNGNLEEKLDELRLLMGKVDGDPLRIVGVGAGAWGSVFTAMLQ 63

Query: 62  DSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 121
           ++YG  REKV IRIWRRPGR VDRA A+HLFEVINSREDVLRRLIRRCAYLKYVE RLGD
Sbjct: 64  EAYGGLREKVLIRIWRRPGRTVDRALAKHLFEVINSREDVLRRLIRRCAYLKYVEGRLGD 123

Query: 122 RTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHY 181
           R L+ADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIV+NG+PSTET EVFEEI  Y
Sbjct: 124 RVLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETREVFEEISKY 183

Query: 182 WKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNK 241
           WKERITVP IISLAKG+EA L P P IITPT MIN+ATG+ +ENILYLGGPNIASEIYNK
Sbjct: 184 WKERITVPAIISLAKGVEAELGPEPRIITPTLMINQATGVPIENILYLGGPNIASEIYNK 243

Query: 242 EYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFLAH 301
           EYANARICGAEKWRKPLAKFLRQPHFIVWDN DLVTHEVMGGLKNVYAIGAG        
Sbjct: 244 EYANARICGAEKWRKPLAKFLRQPHFIVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNE 303

Query: 302 IDYCSMAYFQH 312
                  YF H
Sbjct: 304 SATSKSVYFAH 314


>Glyma02g33340.1 
          Length = 361

 Score =  311 bits (798), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 150/184 (81%), Positives = 161/184 (87%), Gaps = 4/184 (2%)

Query: 138 MIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKERITVPIIISLAKG 197
           MIDTPLCPLKVVTNLQEAVWDADIVVNG+PSTET E+FEEI  YWKERITVP+IISLAKG
Sbjct: 1   MIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKG 60

Query: 198 IEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARICGAEKWRKP 257
           IEAALEPVPHIITPT+MIN+ATG+ MENILYLGGPNIASEIYNKEYANARICG EKWRKP
Sbjct: 61  IEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGDEKWRKP 120

Query: 258 LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGK----FFYFLAHIDYCSMAYFQHQ 313
           LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGA K     +Y + +  Y  +   +H 
Sbjct: 121 LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAEKTIKFIYYSVVNRGYSLLREIKHF 180

Query: 314 QNLC 317
           Q L 
Sbjct: 181 QTLT 184


>Glyma03g28970.1 
          Length = 325

 Score =  309 bits (791), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 147/175 (84%), Positives = 154/175 (88%)

Query: 138 MIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKERITVPIIISLAKG 197
           MI+TPLCPLKVVTNLQEAVWDADIVVNG+PSTET E+FEEI  YWKERITVPIIISL+KG
Sbjct: 1   MIETPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKG 60

Query: 198 IEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARICGAEKWRKP 257
           IEAALEPVPHIITPT+MIN+AT + MENILYLGGPNIASEIYNKEYANARICGAEKWRKP
Sbjct: 61  IEAALEPVPHIITPTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKP 120

Query: 258 LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFLAHIDYCSMAYFQH 312
           LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG               YF H
Sbjct: 121 LAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAH 175


>Glyma12g12510.1 
          Length = 151

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 38/51 (74%)

Query: 208 IITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARICGAEKWRKPL 258
           +I  T  I    G+ +++  YLGGPNIASEIYNKEYANAR+CG EKWRK L
Sbjct: 101 LILDTVCIIHFFGVPLDSFFYLGGPNIASEIYNKEYANARMCGEEKWRKTL 151


>Glyma02g34820.1 
          Length = 39

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 34/39 (87%)

Query: 220 GINMENILYLGGPNIASEIYNKEYANARICGAEKWRKPL 258
           G+ ++ I YLGGPNIASEIYNKEYANARIC AEKWRK L
Sbjct: 1   GVPLDIIFYLGGPNIASEIYNKEYANARICRAEKWRKTL 39


>Glyma16g04990.2 
          Length = 136

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 47/90 (52%), Gaps = 32/90 (35%)

Query: 73  IRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKD 132
           IRI RR GR VDR   +HLFEVINSREDVL +LIR+CAYLKY                  
Sbjct: 2   IRIRRRLGRTVDRGPTKHLFEVINSREDVLWKLIRQCAYLKY------------------ 43

Query: 133 GFCLNMIDTPLCPLKVVTNLQEAVWDADIV 162
                         +VV +L E VWDA I+
Sbjct: 44  --------------EVVISLMEPVWDAGIM 59