Jatropha Genome Database

JcCA0120941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0120941.10 - phase: 0 
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g42480.1                                                       270   1e-72
Glyma03g14630.1                                                       248   6e-66
Glyma07g17630.1                                                       228   3e-60
Glyma01g27380.1                                                        99   3e-21

>Glyma18g42480.1 
          Length = 254

 Score =  270 bits (690), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 176/244 (72%), Gaps = 7/244 (2%)

Query: 1   MMALKAINTSFSPT--KHTLFRTRRPINQKNSILYLCXXXXXXXXXXXXXXXXGDTRKQE 58
           M+ALK+++  F+PT  K+ + R+R  +N K S+L LC                GD RKQE
Sbjct: 1   MIALKSLHPFFTPTNIKYGINRSR-CLNTKGSVLCLCKSNESESQAPQP----GDIRKQE 55

Query: 59  LLARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDKIGEDALKGLDEAGTRIMENIE 118
           LLA+IAMLQ QKVRLTDY DERS YLTQF EEA AEFDKIG+DAL+GLDEA   I  NIE
Sbjct: 56  LLAQIAMLQTQKVRLTDYFDERSEYLTQFGEEAKAEFDKIGKDALQGLDEASAIITANIE 115

Query: 119 SQMQAFEESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPPVDKAKAKVEAE 178
           SQM  FEESAELN+QEI+++E ++ +FE Q+   RNEG+FFKNL ++ PVDK+KAK EAE
Sbjct: 116 SQMVEFEESAELNRQEIQEHEKELGEFEVQMEDGRNEGLFFKNLRRRTPVDKSKAKEEAE 175

Query: 179 RIKELIKTKAGSKARKNIYLALIGVLVIVIADSFISSSPDWRKVAVLGAILVGLITQLSY 238
           +IK++ + KAGS+ RK  YL  IG+L   I DS  SSS DW+K+AVLGA LV L++Q  Y
Sbjct: 176 KIKDVAREKAGSRTRKGFYLLFIGLLTFAIVDSIASSSTDWKKIAVLGATLVALVSQFIY 235

Query: 239 EQRL 242
           EQ +
Sbjct: 236 EQNV 239


>Glyma03g14630.1 
          Length = 248

 Score =  248 bits (632), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/243 (58%), Positives = 165/243 (67%), Gaps = 5/243 (2%)

Query: 1   MMALKAINTSFSPTKHTLFRTRRPINQKNSILYLCXXXXXXXXXXXXXXXXGDTRKQELL 60
           M+ALKAI  S     H     R P  + +S+L  C                GD + QELL
Sbjct: 1   MIALKAIQASSFALHHN--NVRLPHTRASSVLCFCSKSNKNEPDNSQPPPEGDAQSQELL 58

Query: 61  ARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDKIGEDALKGLDEAGTRIMENIESQ 120
           A+IAMLQ QKVRLTD+LDERSAYL QF EEA AEFDKIGEDALKGLDEAG RI  NIESQ
Sbjct: 59  AQIAMLQTQKVRLTDFLDERSAYLAQFGEEAKAEFDKIGEDALKGLDEAGARITANIESQ 118

Query: 121 MQAFEESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPPV--DKAKAKVEAE 178
           M  FEES ELN+ EIE++ENKI +FEGQ+ KDRNEG+FFKNLGQK PV   KAK + E E
Sbjct: 119 MLEFEESTELNRLEIEESENKIVEFEGQMEKDRNEGLFFKNLGQKAPVYKAKAKEEEEVE 178

Query: 179 RIKELIKTKAGSKARKNIYLALIGVLVIVIADSFISSS-PDWRKVAVLGAILVGLITQLS 237
           +IK++    +GSK RKN+YL  IG+L   I DS  SSS  DW+KVAVLG ILV L +   
Sbjct: 179 KIKDVNSESSGSKTRKNVYLFFIGLLTFGIVDSLASSSGADWKKVAVLGGILVVLFSLFI 238

Query: 238 YEQ 240
            EQ
Sbjct: 239 NEQ 241


>Glyma07g17630.1 
          Length = 195

 Score =  228 bits (582), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/193 (64%), Positives = 146/193 (75%)

Query: 65  MLQAQKVRLTDYLDERSAYLTQFAEEANAEFDKIGEDALKGLDEAGTRIMENIESQMQAF 124
           MLQ QKVRL DY DERS YLTQF EEA AEFDKIGEDAL+GLDEA  RI  NIESQM  F
Sbjct: 1   MLQTQKVRLMDYFDERSEYLTQFGEEAKAEFDKIGEDALQGLDEASARITANIESQMVEF 60

Query: 125 EESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPPVDKAKAKVEAERIKELI 184
           EESAELN+QEI++ E ++  FE Q+   RNEG+FFKNL +K PVDKAKAK EAE+IK++ 
Sbjct: 61  EESAELNRQEIQEREKELDKFEVQMEDGRNEGLFFKNLRKKAPVDKAKAKEEAEKIKDVA 120

Query: 185 KTKAGSKARKNIYLALIGVLVIVIADSFISSSPDWRKVAVLGAILVGLITQLSYEQRLSS 244
           + KAGS+ RK IYL  IG+L   I DS  SSS DWRK+AVLGAILV L++Q  YEQ +S 
Sbjct: 121 REKAGSRTRKGIYLLFIGLLTFAIVDSVASSSTDWRKIAVLGAILVALVSQFIYEQTMSI 180

Query: 245 EIESMEKTDKEKK 257
           E   + K D E++
Sbjct: 181 ETGKIRKIDTEEE 193


>Glyma01g27380.1 
          Length = 129

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 7/114 (6%)

Query: 113 IMENIESQMQAFEESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPPVDKAK 172
           I+ NIESQM  FEES ELN+ EIE++ENKI +FE Q+ +DRNEG+FFKNLG K P++KAK
Sbjct: 1   IIANIESQMLEFEESIELNRLEIEESENKIVEFECQMERDRNEGLFFKNLGYKAPIEKAK 60

Query: 173 AK-VEAERIKELIKTKAGSKARKNIYLALIGVLVIVIADSFISSSPDWRKVAVL 225
           AK  E E+IK++     GS ++ N  + LI +L I     F+ S+  W   + L
Sbjct: 61  AKEEEVEKIKDVNSESIGSNSKAN-QIVLIALLWI-----FVHSNLMWFDTSCL 108