Jatropha Genome Database

JcCA0116921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116921.10 - phase: 0 /partial
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02040.2                                                       326   7e-90
Glyma02g01920.1                                                       322   2e-88
Glyma10g02040.1                                                       322   2e-88
Glyma02g01930.1                                                       318   2e-87
Glyma02g01930.2                                                       282   1e-76
Glyma03g16480.1                                                       155   3e-38

>Glyma10g02040.2 
          Length = 490

 Score =  326 bits (836), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 157/173 (90%), Positives = 166/173 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVE+SGALNTIA SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 300 AAHDAFVETSGALNTIAASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 359

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ +GNHVA+TVGGSNGHFELNVFKPMIAS LLHS+RLLGD+SASFEKNCV
Sbjct: 360 QCEALTMVCAQVIGNHVAVTVGGSNGHFELNVFKPMIASCLLHSLRLLGDSSASFEKNCV 419

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLKVIISC 173
           RGIQANRERISKLLHESLMLVT+LNPKIGYD AAAVAK AHKEG TLKV++ C
Sbjct: 420 RGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKTAHKEGCTLKVMMPC 472


>Glyma02g01920.1 
          Length = 495

 Score =  322 bits (825), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 155/168 (92%), Positives = 162/168 (96%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVE+SGALNTIA SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 300 AAHDAFVETSGALNTIAASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 359

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ +GNHVA+TVGGSNGHFELNVFKPMIAS LLHS+RLLGD+SASFEKNCV
Sbjct: 360 QCEALTMVCAQVIGNHVAVTVGGSNGHFELNVFKPMIASCLLHSLRLLGDSSASFEKNCV 419

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGIQANRERISKLLHESLMLVT+LNPKIGYD AAAVAK AHKEG TLK
Sbjct: 420 RGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKTAHKEGCTLK 467


>Glyma10g02040.1 
          Length = 495

 Score =  322 bits (824), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 155/168 (92%), Positives = 162/168 (96%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVE+SGALNTIA SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 300 AAHDAFVETSGALNTIAASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 359

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ +GNHVA+TVGGSNGHFELNVFKPMIAS LLHS+RLLGD+SASFEKNCV
Sbjct: 360 QCEALTMVCAQVIGNHVAVTVGGSNGHFELNVFKPMIASCLLHSLRLLGDSSASFEKNCV 419

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGIQANRERISKLLHESLMLVT+LNPKIGYD AAAVAK AHKEG TLK
Sbjct: 420 RGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKTAHKEGCTLK 467


>Glyma02g01930.1 
          Length = 465

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/168 (90%), Positives = 161/168 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVE+SGALNT+  SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 270 AAHDAFVETSGALNTVVASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 329

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVAITVGGSNGHFELNVFKPMIA+ LLHS+RLLGD+SASFEKNC+
Sbjct: 330 QCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKPMIANCLLHSLRLLGDSSASFEKNCL 389

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGIQANRERISKLLHESLMLVT+LNPKIGYD AA VAK AHKEG+TLK
Sbjct: 390 RGIQANRERISKLLHESLMLVTSLNPKIGYDKAATVAKTAHKEGTTLK 437


>Glyma02g01930.2 
          Length = 420

 Score =  282 bits (722), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/146 (91%), Positives = 142/146 (97%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVE+SGALNT+  SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 270 AAHDAFVETSGALNTVVASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 329

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVAITVGGSNGHFELNVFKPMIA+ LLHS+RLLGD+SASFEKNC+
Sbjct: 330 QCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKPMIANCLLHSLRLLGDSSASFEKNCL 389

Query: 121 RGIQANRERISKLLHESLMLVTALNP 146
           RGIQANRERISKLLHESLMLVT+LNP
Sbjct: 390 RGIQANRERISKLLHESLMLVTSLNP 415


>Glyma03g16480.1 
          Length = 120

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/104 (76%), Positives = 84/104 (80%), Gaps = 7/104 (6%)

Query: 33  GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQGMGNHVAITVGGSNGHFELNV 92
           GPR  LGELILPENE GSSIM        CEAL MVCAQ MGNHVAI VGGSNGHFE NV
Sbjct: 1   GPRYSLGELILPENELGSSIM-------LCEALMMVCAQVMGNHVAIIVGGSNGHFEFNV 53

Query: 93  FKPMIASNLLHSVRLLGDASASFEKNCVRGIQANRERISKLLHE 136
           F+PMI + LLHS+RLLGD+S SFE NC RGIQANRERISKLLHE
Sbjct: 54  FEPMIPNCLLHSLRLLGDSSTSFENNCPRGIQANRERISKLLHE 97