Jatropha Genome Database

JcCA0116311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116311.10 + phase: 0 /partial
         (364 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03900.1                                                       558   e-159
Glyma13g41490.1                                                       557   e-159
Glyma18g07440.1                                                        75   9e-14
Glyma08g45230.1                                                        74   2e-13

>Glyma15g03900.1 
          Length = 796

 Score =  558 bits (1438), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/357 (77%), Positives = 308/357 (86%), Gaps = 1/357 (0%)

Query: 1   MESIIRRCSVMNPKEYAKASNEGDDVFLCEYEYDIHWHTFKRLAEVDNCXXXXXXXXXXX 60
           MES++R C VM PKEYAKAS+EGDDVFLCEYEYDIHWH+FKRLA++DN            
Sbjct: 286 MESVLRHCHVMTPKEYAKASDEGDDVFLCEYEYDIHWHSFKRLADIDNETENGEEHDSDE 345

Query: 61  XWNSSKDAESDTDEDIEYEEESVKNLQAKASSTHVLAANLRKGQFFGLQRIGVKRIPEHV 120
            WN  K+++SDTDED+EYE+E++KN Q+K S++H LAANL+KGQFFGLQ+IG K IP+HV
Sbjct: 346 DWNVDKESDSDTDEDVEYEKENIKNTQSKPSTSHHLAANLQKGQFFGLQKIGTKTIPQHV 405

Query: 121 RCHXXXXXXXXXXXXXXXXXPKSQPCRNKEMEEITAFIKGAIYDDQCLGRCLYIHGVPGT 180
           R H                 PKS PCRNKEMEEITAFI GA+ D+QCLGRCLYIHGVPGT
Sbjct: 406 RSHKQTDLERAKATLLLASLPKSLPCRNKEMEEITAFINGALSDNQCLGRCLYIHGVPGT 465

Query: 181 GKTMSVLAVMRNLKSEVDAGNMRPYCFVEVNGLKLASPENIYRVIYEALSGHRVSWKKAL 240
           GKTMSVL+VMR+LKSEVDAGN++PY FVE+NGLKLASPENIY+VIYEAL+GHRVSWKKAL
Sbjct: 466 GKTMSVLSVMRSLKSEVDAGNIKPYTFVEINGLKLASPENIYKVIYEALNGHRVSWKKAL 525

Query: 241 HLLNERFSDGKKGKGD-DRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN 299
           HLLNERF +GKK + + DRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN
Sbjct: 526 HLLNERFVEGKKTRDEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN 585

Query: 300 TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKV 356
           TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQA+EFASRKV
Sbjct: 586 TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAVEFASRKV 642


>Glyma13g41490.1 
          Length = 851

 Score =  557 bits (1436), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/357 (77%), Positives = 306/357 (85%), Gaps = 1/357 (0%)

Query: 1   MESIIRRCSVMNPKEYAKASNEGDDVFLCEYEYDIHWHTFKRLAEVDNCXXXXXXXXXXX 60
           MES++R C VM PKEYAKASNEGDDVFLCEYEYDIHWH+FKRLA++DN            
Sbjct: 327 MESVLRHCHVMTPKEYAKASNEGDDVFLCEYEYDIHWHSFKRLADIDNETENGEESDSDE 386

Query: 61  XWNSSKDAESDTDEDIEYEEESVKNLQAKASSTHVLAANLRKGQFFGLQRIGVKRIPEHV 120
            WN  K+++SDTDED+EYEEE++KN Q++ S +H LAANL KG+FFGLQ+IG K IP+HV
Sbjct: 387 DWNVGKESDSDTDEDVEYEEENIKNAQSQPSRSHHLAANLYKGRFFGLQKIGTKTIPQHV 446

Query: 121 RCHXXXXXXXXXXXXXXXXXPKSQPCRNKEMEEITAFIKGAIYDDQCLGRCLYIHGVPGT 180
           R H                 PKS PCRNKEMEEIT FIKGAI +DQCLGRCLYIHGVPGT
Sbjct: 447 RSHKQTDLERAKATLLLASLPKSLPCRNKEMEEITTFIKGAISNDQCLGRCLYIHGVPGT 506

Query: 181 GKTMSVLAVMRNLKSEVDAGNMRPYCFVEVNGLKLASPENIYRVIYEALSGHRVSWKKAL 240
           GKTMSVL+VMR+LKSEVDAGN++PY FVE+NGLKLASPENIY+VIYEAL+GHRVSWKKAL
Sbjct: 507 GKTMSVLSVMRSLKSEVDAGNIKPYSFVEINGLKLASPENIYKVIYEALNGHRVSWKKAL 566

Query: 241 HLLNERFSDGKKGKGD-DRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN 299
           HLLNERF +GKK + + D+PCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN
Sbjct: 567 HLLNERFVEGKKTRDEADQPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIAN 626

Query: 300 TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKV 356
           TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQA+EFASRKV
Sbjct: 627 TMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAVEFASRKV 683


>Glyma18g07440.1 
          Length = 248

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 6/174 (3%)

Query: 141 PKSQPCRNKEMEEITAFIKGAIYDDQCLGRCLYIHGVPGTGKTMSVLAVMRNLKSEVDAG 200
           P S  CR +E   +  F KG +   +     LYI G PGTGK++S+  V   L +     
Sbjct: 77  PSSVVCREEEQNMVLEFCKGCVEHQK--AGSLYICGCPGTGKSLSMEKVKDKLLNWAKEE 134

Query: 201 NMRPYCFVEVNGLKLASPENIYRVIYEALSGHRVSWKKALHLLNERFSDGKKGKGDDRPC 260
            +     + VN   L +  +I+  I   L  ++   KK   L  ++  +    K   +  
Sbjct: 135 GLPLPDVLSVNCTTLTNTSDIFTKI---LGLNQTQGKKVSALPLQQLQNMYSQKSSVKNM 191

Query: 261 ILLI-DELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISS 313
            L++ DELD L+T++++VL+++    T P S+ I+IG+AN +DL ++ LPR++S
Sbjct: 192 TLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTS 245


>Glyma08g45230.1 
          Length = 476

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 17/226 (7%)

Query: 141 PKSQPCRNKEMEEITAFIKGAIYDDQCLGRCLYIHGVPGTGKTMSVLAVMRNLKSEVDAG 200
           P S  CR +E   +  F KG + + Q  G  LYI G PGTGK++S+  V   L +     
Sbjct: 76  PSSVVCREEEQNVVLEFCKGCV-EHQKAGS-LYICGCPGTGKSLSMEKVKDKLLNWAKEA 133

Query: 201 NMRPYCFVEVNGLKLASPENIYRVIY--EALSGHRVSWKKALHLLNERFSDGKKGKGDDR 258
            +     + VN     +  +I+  I       G +VS    L  L   +S     K    
Sbjct: 134 GLPQPDVLSVNCTTFTNTSDIFTKILGLNQTQGKKVS-ATPLQQLQNMYSQKSSNKNMT- 191

Query: 259 PCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVI----GIANTMDLPEKLLPRISSR 314
             +++ DELD L+T+++ VL+++    T P S+ I+I    G   T    ++ LPR++S 
Sbjct: 192 --LIVADELDYLITKDRGVLHDLFMLTTFPFSRCILIVNQFGQFKTYCASDRFLPRLTS- 248

Query: 315 MGIQRLC--FGPYNYQQLQEIISSRLKGI--DVFEKQAIEFASRKV 356
           +  + +   F  Y+  Q+ +I+  RL  +   VF++QA+E  +RKV
Sbjct: 249 LNCKPIVVNFRAYSKDQILKILEERLNELPYTVFQQQAMELCARKV 294