Jatropha Genome Database

JcCA0115811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0115811.10 - phase: 0 /partial
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02140.1                                                       164   1e-40
Glyma05g37400.1                                                       164   1e-40

>Glyma08g02140.1 
          Length = 361

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/239 (46%), Positives = 143/239 (59%), Gaps = 43/239 (17%)

Query: 25  ETEAFYPEEFKVEEVSPEWWGYKLGFVPGGLLGAQNKKKSSK-TGNAQKCNERTAFLEED 83
           E + F  E  K   + P+WWGYK GFV GG LGA++KKK S  +G A    ERTAF EED
Sbjct: 162 EIQKFEDEGSKYPAIPPDWWGYKYGFVSGGFLGAESKKKKSMISGKA----ERTAFFEED 217

Query: 84  QENLYKLVQDNATAGKQGLGIKSQPKKIAGVRFQGKKTXXXXXXXXXXXXXXXXXXXXXX 143
           QENLY LVQ+ +T GKQGLGIK +PKK+AG  FQGKK                       
Sbjct: 218 QENLYNLVQEKSTTGKQGLGIKDRPKKVAGCYFQGKK----------------------- 254

Query: 144 XXENHNDAPAVENVEEKVDNEISANFGSLGKRKRDAPGK--NVDEQKVKLKKLCKRILRQ 201
             ++ +D+           +E SA+  SL +   D   K   + E KVKLKKLCK+IL+Q
Sbjct: 255 --KSFDDS-----------DEDSADNDSLEQAANDDLIKVEKIVEGKVKLKKLCKQILQQ 301

Query: 202 VPGESXXXXXXXXXIEEHSSTVFSNFSSKRDALTHLKQKLEGSQKFCVDGKRVSLMCRR 260
           VPGES         I+EHSS++ S+FSS+R+++ +LKQKL GS+KF ++GKRV L  +R
Sbjct: 302 VPGESLKLKQLKVLIDEHSSSILSDFSSRRESVAYLKQKLTGSRKFYIEGKRVRLASKR 360


>Glyma05g37400.1 
          Length = 362

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 140/237 (59%), Gaps = 39/237 (16%)

Query: 25  ETEAFYPEEFKVEEVSPEWWGYKLGFVPGGLLGAQ-NKKKSSKTGNAQKCNERTAFLEED 83
           E + F  E  +   + P+WWGYK GFV GG LGA+  KKKS  +G A    ERTAF EED
Sbjct: 163 EIQNFEDEGSQYPAIPPDWWGYKYGFVSGGFLGAELKKKKSMISGKA----ERTAFFEED 218

Query: 84  QENLYKLVQDNATAGKQGLGIKSQPKKIAGVRFQGKKTXXXXXXXXXXXXXXXXXXXXXX 143
           QENLY LVQ+ +T GKQGLGIK +PKK+AG  FQGKKT                      
Sbjct: 219 QENLYNLVQEKSTTGKQGLGIKDRPKKVAGCYFQGKKT---------------------S 257

Query: 144 XXENHNDAPAVENVEEKVDNEISANFGSLGKRKRDAPGKNVDEQKVKLKKLCKRILRQVP 203
             ++  D+   +++E+  ++++                + + E KVKLKKLCK IL+QVP
Sbjct: 258 FDDSDEDSADNDSLEQPANDDL-------------IKVEKIVEGKVKLKKLCKHILQQVP 304

Query: 204 GESXXXXXXXXXIEEHSSTVFSNFSSKRDALTHLKQKLEGSQKFCVDGKRVSLMCRR 260
           GES         I+E SS++ S+FSS+R+A+ +LKQKL GS+KFC++GKRV    +R
Sbjct: 305 GESLKLKQLKVLIDERSSSILSDFSSRREAVAYLKQKLTGSRKFCIEGKRVRFTSKR 361