Jatropha Genome Database

JcCA0109511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0109511.10 + phase: 0 
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g39140.1                                                       420   e-118
Glyma02g26780.1                                                       350   1e-96
Glyma03g36480.1                                                       142   7e-34

>Glyma19g39140.1 
          Length = 520

 Score =  420 bits (1080), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/314 (61%), Positives = 248/314 (78%), Gaps = 2/314 (0%)

Query: 2   IDIELVPXXXXXXXXXXXXPTFHCDLYDADLVRRIAQVFLPGLSAACVDNTTGGIFRSPA 61
           ID++L P            P  HCDL D ++V ++AQ+FLPGL++ACVDNT+G +F++P 
Sbjct: 12  IDVDLGPEKLEDEKQGG--PLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFKTPG 69

Query: 62  SVAVEMRKEMIEYLTMRSETFVAETIILEGGQNEEISDHPYDIISDFVDDFASSKRNFFS 121
           SVAV++RKEMIEY+T RSE+FVAE++ILEGG + E SDHP+DIISDFVDDF SSKRN FS
Sbjct: 70  SVAVDLRKEMIEYVTQRSESFVAESVILEGGPDGEESDHPFDIISDFVDDFVSSKRNLFS 129

Query: 122 RVQGWILSEKREDKIDDFVQEMEVNGFWLSDRREVIAQNLVKNVDYKNIFYCDKKFYTAE 181
           RV GW+LSEKRED+IDDFVQEME+NGFW  DRRE IA+ L+KNVD++N ++C+  F +AE
Sbjct: 130 RVSGWLLSEKREDRIDDFVQEMEMNGFWTLDRRETIAETLLKNVDFENSYHCNMSFNSAE 189

Query: 182 ELAEHVINCDFRTVNCTNDGCVSFFCASQLEKHDSTCPFKIIPCEQKCSDHIMRREMDRH 241
           EL  HV NC+FRT+ C N+GC S FCA+ L+ HDSTCPFKIIPCEQKCSD IMRREMDRH
Sbjct: 190 ELVNHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCPFKIIPCEQKCSDCIMRREMDRH 249

Query: 242 CITVCPMKLVNCPSMLWVVPAAITRSMIQQHCLDDLNSHLVYALKNIHKEASEEDLKDRL 301
           CIT+CPMKLVNCP  +    +A+ + MI++H LDD++SHL + LK I+K+A  +DLK R+
Sbjct: 250 CITICPMKLVNCPFYVVGCRSAVAQCMIEKHRLDDVHSHLWHLLKGIYKQAYGDDLKRRV 309

Query: 302 DQIMQVSQRLMILE 315
           +QI+Q S    + E
Sbjct: 310 EQIVQASSSSRLAE 323


>Glyma02g26780.1 
          Length = 401

 Score =  350 bits (899), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 167/296 (56%), Positives = 217/296 (73%), Gaps = 16/296 (5%)

Query: 21  PTFHCDLYDADLVRRIAQVFLPGLSAACVDNTTGGIFRSPASVAVEMRKEMIEYLTMRSE 80
           P FHCD  D ++V ++AQ+FLPGL+ A               +AV++RKEMIE++T +SE
Sbjct: 29  PLFHCDFCDTEVVHKLAQMFLPGLACA---------------LAVDLRKEMIEFVTQKSE 73

Query: 81  TFVAETIILEGGQNEEISDHPYDIISDFVDDFASSKRNFFSRVQGWILSEKREDKIDDFV 140
           +FVAE++ILEGG +    +HP+DII  FVD+F SSKRN  S+V GW+LS+KREDKIDDFV
Sbjct: 74  SFVAESVILEGGPDGGALEHPFDIICYFVDEFVSSKRNLLSQVSGWLLSDKREDKIDDFV 133

Query: 141 QEMEVNGFWLSDRREVIAQNLVKNVDYKNIFYCDKKFYTAEELAEHVIN-CDFRTVNCTN 199
           QEME+NGFW  DRRE +A+ L+KNVD K+ F+C   F +A +LA H  + C+FR V C N
Sbjct: 134 QEMEMNGFWPLDRRETLAKTLIKNVDVKSSFHCSMSFKSARDLANHADDGCNFRPVICRN 193

Query: 200 DGCVSFFCASQLEKHDSTCPFKIIPCEQKCSDHIMRREMDRHCITVCPMKLVNCPSMLWV 259
           +GC + F A  L++HDS C FKI+PCEQKC+D I+RREMDRHCITVCPMKLVNCP     
Sbjct: 194 EGCDARFSAGHLKEHDSACDFKIVPCEQKCTDSILRREMDRHCITVCPMKLVNCPFYAVG 253

Query: 260 VPAAITRSMIQQHCLDDLNSHLVYALKNIHKEASEEDLKDRLDQIMQVSQRLMILE 315
             +AI +SMI++HC DD+ SHL+  LK IH+EAS EDLK R++QI+Q S R  + E
Sbjct: 254 CRSAIAQSMIRKHCSDDIESHLLLMLKGIHQEASGEDLKRRVEQILQASSRSKLAE 309


>Glyma03g36480.1 
          Length = 614

 Score =  142 bits (357), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 86/111 (77%), Gaps = 2/111 (1%)

Query: 2   IDIELVPXXXXXXXXXXXXPTFHCDLYDADLVRRIAQVFLPGLSAACVDNTTGGIFRSPA 61
           ID++L P            P  HCDL D ++V ++AQ+FLPGL++ACVDNT+G +F++P 
Sbjct: 6   IDVDLGPEKLEDEKQGG--PLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFKTPG 63

Query: 62  SVAVEMRKEMIEYLTMRSETFVAETIILEGGQNEEISDHPYDIISDFVDDF 112
           SVAV++RKEMIEY+T RSE+FVAE++ILEG  + E+SDHP+DIIS+ VDDF
Sbjct: 64  SVAVDLRKEMIEYVTQRSESFVAESVILEGSPDGEVSDHPFDIISNLVDDF 114