Jatropha Genome Database

JcCA0101681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0101681.10 + phase: 1 /pseudo/partial
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46300.1                                                       393   e-109
Glyma14g02260.1                                                       390   e-108
Glyma14g02410.1                                                       388   e-108
Glyma03g15590.1                                                        63   3e-10

>Glyma02g46300.1 
          Length = 447

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/233 (78%), Positives = 209/233 (89%)

Query: 22  IVEHQEALRTYNALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 81
           +VEH+EALRT NALE+ S+YDIIVDATDNAP+RY+ISDCCVVLGKPLVSGAALGLEGQLT
Sbjct: 145 VVEHEEALRTSNALELLSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGLEGQLT 204

Query: 82  VYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIASDIGEPLSG 141
           VYNY GGPCYRCLFPTPPP TACQ CA+ GVLGVVPGIIGCLQALEAIKIA+ +GEPLSG
Sbjct: 205 VYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIAASVGEPLSG 264

Query: 142 RMLLLDALSARIRIVKIRSRSLNCEVCGETAAFNQKQFRDFDYEKFTQSPLSTAPPKLNL 201
           RML+LDALS RIRIVKIR RS+ CE CGE A F Q+QFR+FDYEKFTQ+PL   P KLNL
Sbjct: 265 RMLILDALSGRIRIVKIRGRSMQCEACGENATFTQQQFREFDYEKFTQTPLRVPPLKLNL 324

Query: 202 LSAGSRITSKDFNEKIVKGEGHVLLDVRPAHHFKIVALPNALNIPLASLEAKV 254
           L + SRI+SK+++E I+K E HVL+DVRPAHHFKIV+LP +LNIPL++LEA++
Sbjct: 325 LPSESRISSKEYSEVILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLEARL 377


>Glyma14g02260.1 
          Length = 457

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/242 (76%), Positives = 209/242 (86%), Gaps = 2/242 (0%)

Query: 15  CCCCLSLI--VEHQEALRTYNALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGA 72
           CC   S I  VEH+EAL+T NALEI S+YDIIVDATDNAP+RY+ISDCCVVLGKPLVSGA
Sbjct: 146 CCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGA 205

Query: 73  ALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIA 132
           ALGLEGQLTVYNY GGPCYRCLFPTPPP TACQ CA+ GVLGVVPGIIGCLQALEAIKIA
Sbjct: 206 ALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIA 265

Query: 133 SDIGEPLSGRMLLLDALSARIRIVKIRSRSLNCEVCGETAAFNQKQFRDFDYEKFTQSPL 192
           + +GEPLSGRMLLLDALS RIRIVKIR RS+ CE CGE A F Q+QFR+FDYEKFTQ+PL
Sbjct: 266 ASVGEPLSGRMLLLDALSGRIRIVKIRGRSMQCEACGENATFTQQQFREFDYEKFTQTPL 325

Query: 193 STAPPKLNLLSAGSRITSKDFNEKIVKGEGHVLLDVRPAHHFKIVALPNALNIPLASLEA 252
              P KLNLL   SRI+SK+++E I+K   HVL+DVRPAHHFKI +LP +LNIPL++LEA
Sbjct: 326 RVPPLKLNLLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEA 385

Query: 253 KV 254
           ++
Sbjct: 386 RL 387


>Glyma14g02410.1 
          Length = 361

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/242 (76%), Positives = 209/242 (86%), Gaps = 2/242 (0%)

Query: 15  CCCCLSLI--VEHQEALRTYNALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGA 72
           CC   S I  VEH+EAL+T NALEI S+YDIIVDATDNAP+RY+ISDCCVVLGKPLVSGA
Sbjct: 50  CCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGA 109

Query: 73  ALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIA 132
           ALGLEGQLTVYNY GGPCYRCLFPTPPP TACQ CA+ GVLGVVPGIIGCLQALEAIKIA
Sbjct: 110 ALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIA 169

Query: 133 SDIGEPLSGRMLLLDALSARIRIVKIRSRSLNCEVCGETAAFNQKQFRDFDYEKFTQSPL 192
           + +GEPLSGRMLLLDALS RIRIVKIR RS+ CE CGE A F Q+QFR+FDYEKFTQ+PL
Sbjct: 170 ASVGEPLSGRMLLLDALSGRIRIVKIRGRSMQCEACGENATFTQQQFREFDYEKFTQTPL 229

Query: 193 STAPPKLNLLSAGSRITSKDFNEKIVKGEGHVLLDVRPAHHFKIVALPNALNIPLASLEA 252
              P KLNLL   SRI+SK+++E I+K   HVL+DVRPAHHFKI +LP +LNIPL++LEA
Sbjct: 230 RVPPLKLNLLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEA 289

Query: 253 KV 254
           ++
Sbjct: 290 RL 291


>Glyma03g15590.1 
          Length = 131

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 27/36 (75%)

Query: 80  LTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGV 115
           LTVYNY GG CY CLFPTPPP T CQ C   GVLGV
Sbjct: 22  LTVYNYNGGSCYGCLFPTPPPRTTCQSCVKGGVLGV 57