Jatropha Genome Database

JcCA0098341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0098341.10 + phase: 1 /pseudo/partial
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06940.1                                                       150   4e-37
Glyma13g00850.1                                                       149   5e-37
Glyma10g44170.1                                                       126   4e-30
Glyma10g44170.2                                                       125   8e-30
Glyma03g03910.1                                                       125   8e-30
Glyma10g08150.1                                                       117   4e-27
Glyma01g33070.1                                                       115   1e-26
Glyma01g33070.2                                                       115   1e-26
Glyma20g38930.2                                                       112   1e-25
Glyma20g38930.1                                                       112   1e-25
Glyma13g21890.1                                                        92   2e-19
Glyma13g21910.1                                                        88   2e-18
Glyma10g08080.1                                                        79   2e-15
Glyma10g08120.1                                                        57   7e-09
Glyma13g21930.1                                                        56   9e-09
Glyma13g00850.2                                                        49   1e-06
Glyma02g26820.2                                                        48   2e-06
Glyma02g26820.1                                                        48   2e-06

>Glyma17g06940.1 
          Length = 411

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 82/93 (88%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPDIEGDK+FGIQSF+VRLGQ+ VFW C++LLEIAYGVA+LVGAAS   WSK  T +G
Sbjct: 307 KDIPDIEGDKVFGIQSFSVRLGQKPVFWTCVTLLEIAYGVALLVGAASPCLWSKIFTGLG 366

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           HA+LA+ILW  AKSVDLKSKA+ITS YMFIWK+
Sbjct: 367 HAVLASILWFHAKSVDLKSKASITSFYMFIWKL 399


>Glyma13g00850.1 
          Length = 395

 Score =  149 bits (377), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 82/93 (88%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPDIEGDK+FGIQSF+VRLGQ+ VFW C+ LLEIAYGVA+LVGAAS   WSK VT +G
Sbjct: 291 KDIPDIEGDKVFGIQSFSVRLGQKPVFWTCVILLEIAYGVALLVGAASPCLWSKIVTGLG 350

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           HA+LA+ILW  AKSVDLKSKA+ITS YMFIWK+
Sbjct: 351 HAVLASILWFHAKSVDLKSKASITSFYMFIWKL 383


>Glyma10g44170.1 
          Length = 432

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPD+EGDK  GI SF VRLGQ+R FWIC+S  E+A+GV IL GA+ S+ W+K  T +G
Sbjct: 305 KDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMG 364

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+LA+ILW +AKSVDL  KA+  S YMFIWKV
Sbjct: 365 NAVLASILWYQAKSVDLSDKASTGSFYMFIWKV 397


>Glyma10g44170.2 
          Length = 409

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 73/93 (78%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPD+EGDK  GI SF VRLGQ+R FWIC+S  E+A+GV IL GA+ S+ W+K  T +G
Sbjct: 305 KDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMG 364

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+LA+ILW +AKSVDL  KA+  S YMFIWK+
Sbjct: 365 NAVLASILWYQAKSVDLSDKASTGSFYMFIWKL 397


>Glyma03g03910.1 
          Length = 365

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 75/93 (80%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KD+PDIEGDK FGI S + RLGQ+ VFW+C+ L E+A+GV +L GA+SSY W K VT +G
Sbjct: 260 KDVPDIEGDKAFGIHSISARLGQKWVFWLCVFLFEMAFGVGLLAGASSSYLWIKIVTGLG 319

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+LA++LW++AK VDLKSK ++ S YM IWKV
Sbjct: 320 YAVLASVLWHQAKIVDLKSKTSMRSFYMLIWKV 352


>Glyma10g08150.1 
          Length = 317

 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 70/94 (74%), Gaps = 1/94 (1%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSY-TWSKCVTVV 81
           KDIPDIEGDK FGI SF+ RLGQ++VFWIC+SL E+A+GVA L G  SS   W K VT +
Sbjct: 212 KDIPDIEGDKKFGIHSFSARLGQKQVFWICVSLFEMAFGVAFLAGVTSSACLWIKIVTGL 271

Query: 82  GHAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           G+ ILA+ILW + K VDL S A+  S YM IWK+
Sbjct: 272 GNVILASILWYQTKYVDLTSPASTRSFYMLIWKL 305


>Glyma01g33070.1 
          Length = 393

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 73/93 (78%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPD+EGDKI+GI +F +R+GQ++VFWICI L E+A+GV+++ GA SS    K +T VG
Sbjct: 288 KDIPDVEGDKIYGIDTFAIRIGQKQVFWICIFLFEMAFGVSLVAGATSSSLLVKIITGVG 347

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+LA++LW +A S+DL SK +  S YM IWK+
Sbjct: 348 NAVLASVLWFQANSIDLSSKTSGGSFYMLIWKL 380


>Glyma01g33070.2 
          Length = 392

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 73/93 (78%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPD+EGDKI+GI +F +R+GQ++VFWICI L E+A+GV+++ GA SS    K +T VG
Sbjct: 288 KDIPDVEGDKIYGIDTFAIRIGQKQVFWICIFLFEMAFGVSLVAGATSSSLLVKIITGVG 347

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+LA++LW +A S+DL SK +  S YM IWK+
Sbjct: 348 NAVLASVLWFQANSIDLSSKTSGGSFYMLIWKL 380


>Glyma20g38930.2 
          Length = 408

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 70/93 (75%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDI D++GDK +GI +  +RLGQ+ VFWICI L E+A+GVA+L GA SSY W K VT +G
Sbjct: 304 KDISDVKGDKAYGIDTLAIRLGQKWVFWICIILFEMAFGVALLAGATSSYLWIKIVTGLG 363

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           HAILA+IL  +AKS+ L +K +  S YM IWK+
Sbjct: 364 HAILASILLYQAKSIYLSNKVSTISFYMLIWKL 396


>Glyma20g38930.1 
          Length = 408

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 70/93 (75%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDI D++GDK +GI +  +RLGQ+ VFWICI L E+A+GVA+L GA SSY W K VT +G
Sbjct: 304 KDISDVKGDKAYGIDTLAIRLGQKWVFWICIILFEMAFGVALLAGATSSYLWIKIVTGLG 363

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           HAILA+IL  +AKS+ L +K +  S YM IWK+
Sbjct: 364 HAILASILLYQAKSIYLSNKVSTISFYMLIWKL 396


>Glyma13g21890.1 
          Length = 244

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 50/59 (84%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVV 81
           KDIPDIEGDK +GI SF+ RLGQ+RVFWIC+SL E+A+GVA+L GAASS  W K VTV+
Sbjct: 180 KDIPDIEGDKKYGIHSFSARLGQKRVFWICVSLFEMAFGVALLAGAASSCLWIKIVTVI 238


>Glyma13g21910.1 
          Length = 256

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 47/57 (82%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVT 79
           KDIPDIEGDK +GI SF+ RLGQ+RVFWIC+SL E+A+GVA+L GA SS  W K VT
Sbjct: 200 KDIPDIEGDKKYGIHSFSARLGQKRVFWICVSLFEMAFGVALLAGATSSCLWIKIVT 256


>Glyma10g08080.1 
          Length = 295

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 44/59 (74%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVV 81
           KDIPDIEGDK FGI SF+ R GQ++VFWIC+   E A+GVA+L GA SS  W K  T++
Sbjct: 177 KDIPDIEGDKKFGIHSFSARFGQKQVFWICVWGFETAFGVALLAGATSSCLWIKIATIL 235


>Glyma10g08120.1 
          Length = 365

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 4/41 (9%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICIS----LLEIA 59
           KDIPDIEGD  FGI+SF  RLG+++VFWIC+S    LLE++
Sbjct: 307 KDIPDIEGDTKFGIRSFATRLGKKKVFWICVSYSKWLLELS 347


>Glyma13g21930.1 
          Length = 71

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 58  IAYGVAILVGAASSY-TWSKCVTVVGHAILAAILWNRAKSVDLKSKAAITSCYMFIWKV 115
           +A+GVA+L G  SS   W K VT +G+A+LA+ILW + + VDL S A+  S YM IWK+
Sbjct: 1   MAFGVALLAGVTSSACLWMKIVTGLGNAVLASILWYQTQYVDLTSPASTRSFYMLIWKL 59


>Glyma13g00850.2 
          Length = 320

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/22 (90%), Positives = 22/22 (100%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLG 44
           KDIPDIEGDK+FGIQSF+VRLG
Sbjct: 291 KDIPDIEGDKVFGIQSFSVRLG 312


>Glyma02g26820.2 
          Length = 340

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KD+PD+EGD+ + I +F  +LG   + ++   +L + Y V++L        + + + +  
Sbjct: 235 KDLPDVEGDRKYQISTFATKLGVRNIAFLGSGILLVNYIVSVLAAIYMPQAFRRWLLIPA 294

Query: 83  HAILAAILWNRAKSVDLK--SKAAITSCYMFIWKV 115
           H I A  L  +A  ++    +K AI+  Y FIW +
Sbjct: 295 HTIFAISLIYQAWILEQANYTKDAISGFYRFIWNL 329


>Glyma02g26820.1 
          Length = 389

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KD+PD+EGD+ + I +F  +LG   + ++   +L + Y V++L        + + + +  
Sbjct: 284 KDLPDVEGDRKYQISTFATKLGVRNIAFLGSGILLVNYIVSVLAAIYMPQAFRRWLLIPA 343

Query: 83  HAILAAILWNRAKSVDLK--SKAAITSCYMFIWKV 115
           H I A  L  +A  ++    +K AI+  Y FIW +
Sbjct: 344 HTIFAISLIYQAWILEQANYTKDAISGFYRFIWNL 378