Jatropha Genome Database

JcCA0081341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081341.10 + phase: 2 /partial
         (70 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37980.2                                                       123   6e-29
Glyma19g37980.1                                                       123   6e-29
Glyma12g31040.2                                                       120   5e-28
Glyma12g31040.1                                                       120   5e-28
Glyma11g35450.2                                                       119   1e-27
Glyma13g39270.2                                                       118   1e-27
Glyma13g39270.1                                                       118   1e-27
Glyma11g35450.4                                                       118   1e-27
Glyma11g35450.3                                                       118   1e-27
Glyma11g35450.1                                                       117   2e-27
Glyma18g02970.1                                                       102   7e-23
Glyma04g32330.1                                                       102   1e-22

>Glyma19g37980.2 
          Length = 216

 Score =  123 bits (308), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 60/70 (85%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS VV+ SK  NR FT TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISQVVSNSKEKNRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma19g37980.1 
          Length = 216

 Score =  123 bits (308), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 60/70 (85%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS VV+ SK  NR FT TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISQVVSNSKEKNRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma12g31040.2 
          Length = 216

 Score =  120 bits (300), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 59/70 (84%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++T SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma12g31040.1 
          Length = 216

 Score =  120 bits (300), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 59/70 (84%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++T SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma11g35450.2 
          Length = 204

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma13g39270.2 
          Length = 216

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma13g39270.1 
          Length = 216

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma11g35450.4 
          Length = 216

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma11g35450.3 
          Length = 216

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma11g35450.1 
          Length = 264

 Score =  117 bits (294), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  KLQSYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKM 60
          KLQS  LRE IS ++  SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKM
Sbjct: 3  KLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61 KICMLGDAQH 70
          KICMLGDAQH
Sbjct: 63 KICMLGDAQH 72


>Glyma18g02970.1 
          Length = 209

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 47/53 (88%)

Query: 18 SKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKMKICMLGDAQH 70
          SK  NR F  TIELQIGLKNYDPQKDKR SGSVKLPHIPRPKMKICMLGDAQH
Sbjct: 4  SKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQH 56


>Glyma04g32330.1 
          Length = 196

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 52/67 (77%)

Query: 4  SYTLREVISTVVTRSKNGNRNFTGTIELQIGLKNYDPQKDKRSSGSVKLPHIPRPKMKIC 63
          S   RE IS ++T SK  NR F  TIELQI LKNYDPQKDKR SGSVKL HIP PKMKIC
Sbjct: 1  SDAFREAISGIMTDSKEKNRKFVETIELQIRLKNYDPQKDKRFSGSVKLRHIPCPKMKIC 60

Query: 64 MLGDAQH 70
          MLGDAQH
Sbjct: 61 MLGDAQH 67