Jatropha Genome Database

JcCA0081131.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081131.20 + phase: 0 
         (253 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g38080.1                                                       203   1e-52
Glyma14g39950.1                                                       199   2e-51
Glyma06g02340.1                                                       149   4e-36
Glyma04g02280.1                                                       132   4e-31

>Glyma17g38080.1 
          Length = 229

 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/249 (52%), Positives = 157/249 (63%), Gaps = 54/249 (21%)

Query: 11  ILKFLPKAAS-AVYFHNPPFSPNRDRRSDNNYCHRLKAHVGKGF-SGPFVSMIPDEVRRK 68
           I K LPKAA+ +V F NPPFSP RD        H+ K + GKGF SG    MIPDE RRK
Sbjct: 17  IFKILPKAAAMSVTFQNPPFSPGRD--------HKCKHYGGKGFFSG---RMIPDEARRK 65

Query: 69  PKNG-SFETQEPTSPKVSCIGQIKHKKKMVNKTKRTSPPKEIKAVSSPRD--VKKHASKF 125
            KNG   ETQEPTSPK+SC+GQIKHKK        + P        +PRD  VKKHASKF
Sbjct: 66  AKNGHGVETQEPTSPKISCMGQIKHKKGGAKNMSMSMP--------TPRDPEVKKHASKF 117

Query: 126 KRLFSISA-KPTAGRRSDASIYDRPPLSDRAPS--LGQMKRFASGRDTFSNFDWTAQITP 182
           +R+    A KP   ++SDA +      S+RAP+  +G M+RFASGR+TFSNFDW AQI P
Sbjct: 118 QRMLLFHAGKP---KQSDADVE-----SERAPAPPMGHMRRFASGRETFSNFDWKAQIAP 169

Query: 183 VESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIGSGAAL----QPRKEVNLWKRRTM 238
                     D+ DR+      +DE+IIPFSAP+ +G   AL    QPRKE+NLWKRRTM
Sbjct: 170 ---------HDDVDRL------DDEIIIPFSAPLTLGGATALNLNVQPRKEINLWKRRTM 214

Query: 239 NPPKPLQLN 247
            PP+PL+LN
Sbjct: 215 APPRPLKLN 223


>Glyma14g39950.1 
          Length = 246

 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/252 (54%), Positives = 159/252 (63%), Gaps = 41/252 (16%)

Query: 11  ILKFLPKAASA---VYFHNPPFSPNRDRRSDNNYCHRLKAHVGKGF-SGPFVSMIPDEVR 66
           I K LPKAA+A   + F NPPFSP RD        H+ K H GKGF SGP   MIP E R
Sbjct: 15  IFKILPKAAAAAVSMTFQNPPFSPGRD--------HKFKHHGGKGFFSGP---MIPVEAR 63

Query: 67  RKPKNGSFETQEPTSPKVSCIGQIKHKKKMVNKTKRTSPPKEIKAVSSPRDVKKHASKFK 126
           RK K+G  ETQEPTSPK+SC+GQIKHKKK     K          +S P + KK ASKF+
Sbjct: 64  RKSKDGCVETQEPTSPKISCMGQIKHKKKKNQIKKAAK------TMSMPTEEKKQASKFQ 117

Query: 127 RLFSI-SAKPT--AGRR--SDASI-YDRPPLSDRAPSLGQMKRFASGRDTFSNFDWTAQI 180
           R+ S  S KP   A R+  SDA +  +R P    AP LG M+RFASGR+TFSNFDW AQI
Sbjct: 118 RMMSFHSGKPKRPAARKQQSDADLESERSP----APPLGHMRRFASGRETFSNFDWKAQI 173

Query: 181 TPVESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIGSGAA-----LQPRKEVNLWKR 235
            P E   RD  S  DDR+      EDE+IIPFSAP+ +G  A+      QPRKE+NLWKR
Sbjct: 174 APEE---RDCYSYYDDRL--ESDAEDEIIIPFSAPLTVGGAASALNLNAQPRKEINLWKR 228

Query: 236 RTMNPPKPLQLN 247
           RTM PP+PLQLN
Sbjct: 229 RTMAPPRPLQLN 240


>Glyma06g02340.1 
          Length = 259

 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/274 (42%), Positives = 151/274 (55%), Gaps = 53/274 (19%)

Query: 8   KNNILKFLPKAASAVY--FHNPPFSPNRDRRSDNNYCHRLKAHVGKGFSGPFVSMIPDEV 65
           K+ ILK LPKA SAV   F N PFSP RD +S                  P VSMIP E 
Sbjct: 2   KSKILKALPKAVSAVTVTFQNHPFSPGRDHKS-----------------KPIVSMIPHEA 44

Query: 66  RRKPKN-------GSFETQEPTSPKVSCIGQIKHKKKMVNKTK----------RTSPPKE 108
           RRK  +           +QEPTSPK+SC+GQIKHKKK + K+K          R    K+
Sbjct: 45  RRKTHDRGNNNDIDEIYSQEPTSPKISCMGQIKHKKKQIEKSKSKSKSMTKEARNVASKQ 104

Query: 109 IKAVSSPRDVKKHASKFKR--LFSISAKPTAGRRSDASI------YDRPPLSDRAPSLGQ 160
             + S   +VK H S F++  LF  +   + GR+S+AS             + RAP + Q
Sbjct: 105 TSSASRDIEVKNHVSTFQKMLLFHGTKPKSDGRKSNASAPGDINKDRALADAARAPRVSQ 164

Query: 161 MKRFASGRDTFSNFDW-TAQITPVESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIG 219
           M+RF+SGRD   +FDW  AQ+ P E +  DY SD   R+     EE+++IIPFSAP+L+G
Sbjct: 165 MRRFSSGRDALGDFDWKVAQVAPDEEE-IDYYSDH-YRVDSDGDEEEQIIIPFSAPLLVG 222

Query: 220 SGAA------LQPRKEVNLWKRRTMNPPKPLQLN 247
            G        L+PR E+NLWKRRTM PP+PLQL+
Sbjct: 223 VGVGHGGVLNLKPRIEINLWKRRTMAPPRPLQLD 256


>Glyma04g02280.1 
          Length = 257

 Score =  132 bits (332), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/274 (43%), Positives = 151/274 (55%), Gaps = 55/274 (20%)

Query: 8   KNNILKFLPKAASAVY--FHNPPFSPNRDRRSDNNYCHRLKAHVGKGFSGPFVSMIPDEV 65
           K+ ILK LPKA +AV   F N PFSP RD +S                  P VSMIP E 
Sbjct: 2   KSKILKALPKAVAAVTVTFQNHPFSPGRDHKSK-----------------PIVSMIPHEA 44

Query: 66  RRKP----KNGSFE--TQEPTSPKVSCIG----------QIKHKKKMVNKTKRTSPPKEI 109
           RRK      NG  E  +QEPTSPK+SC+G          + K K K + K  R    K+ 
Sbjct: 45  RRKTHDRGNNGIDEIYSQEPTSPKISCMGQIKHKKKQIKKSKSKSKSMTKEARNVASKKT 104

Query: 110 KAVSSPRDVKKHASKF-KRLFSISAKP-TAGRRSDASI------YDRPPLSDRAPSLGQM 161
            + S   +VKKH S F K L    AKP + GR+S+AS             + RAP + QM
Sbjct: 105 SSASRDIEVKKHVSTFHKMLLFHGAKPKSEGRKSNASAPGDINKDLALADAARAPRVSQM 164

Query: 162 KRFASGRDTFSNFDWTAQITPVESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIGSG 221
           +RF+SGRD  + FDW  +++P E +  DY SDE  R+     EE+E+IIPFSAP+L+G G
Sbjct: 165 RRFSSGRDALAEFDW--KVSPDE-EEIDYYSDE-YRVDSDGEEEEEIIIPFSAPLLVGGG 220

Query: 222 AA--------LQPRKEVNLWKRRTMNPPKPLQLN 247
                     L+PRKE+NLWKRRTM PP+PLQL+
Sbjct: 221 VGHTRGGVLNLKPRKEINLWKRRTMAPPRPLQLD 254