Jatropha Genome Database
- JcCA0080751.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0080751.20 - phase: 0 /partial
(413 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g12430.1 51 2e-06
Glyma08g42390.1 51 3e-06
Glyma08g42390.2 50 3e-06
>Glyma18g12430.1
Length = 739
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 56 ALMERWNDCTHTLVFGFGKMTLTPVDYAAITGLHFTGPVPPLDARYQTVAIGAQLVRSLL 115
AL+ERW T+T G+MT+T D A + GL G P + Y A G+ + L
Sbjct: 86 ALVERWRRETNTFHLNVGEMTVTLKDVALLLGLAIDGE-PVIGITY--TACGS-VCEKYL 141
Query: 116 GVTTQTRYTVQGCMSYETVFRFWAERIRTRLEAWRELPEDVRPAAPAYTREERDQAAWSF 175
G + ++ YT G + W + E + PED AP E+ +A +
Sbjct: 142 GRSPESGYTSGGMVKLS-----WLK------EYFSRCPED----APIEVIEQHTRA---Y 183
Query: 176 LFYIISSQLLCTSQNKGDPAV-LECLRDLSQVGSFDWATLGLAHLYHGLDVWTHGSGESN 234
L Y++ S + T+ P + L + + G + W LA LY L + + +
Sbjct: 184 LLYLVGSTIFSTTTGNKVPVMYLPLFENFDRCGQYAWGAAALAFLYRALGNASLKTQSTI 243
Query: 235 WLFIRPLEVWSYEYCIYPGGPSGDSPVESRRIPRYL--AHCHHTYASGEDPEYWRSFLND 292
+ L+ WSY + + G P + + R P L + D ++R L+
Sbjct: 244 SGCLTLLQCWSY-FHLNIGRPKLNLELMHDRFPFVLRWKGKQSGPTANRDVVFYRKALD- 301
Query: 293 REVSDLSLTPWDCEAWRTYPGRE--VAELHTRSRLLM 327
SL P D E W Y + V H +S L++
Sbjct: 302 ------SLKPCDVE-WLPYRNMDSMVIPEHIKSTLIL 331
>Glyma08g42390.1
Length = 692
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 56 ALMERWNDCTHTLVFGFGKMTLTPVDYAAITGLHFTGPVPPLDARYQTVAIGAQLVRSLL 115
AL+ERW T+T G+MT+T D A + GL G P + Y + + L
Sbjct: 86 ALVERWRRETNTFHLNVGEMTVTLKDVALLLGLAIDGE-PVIGITYTAC---SSVCEKYL 141
Query: 116 GVTTQTRYTVQGCMSYETVFRFWAERIRTRLEAWRELPEDVRPAAPAYTREERDQAAWSF 175
G + ++ YT G + + F++ PED AP E+ +A +
Sbjct: 142 GRSPESGYTSGGMVKLSWLKEFFS-----------RCPED----APLEVIEQHTRA---Y 183
Query: 176 LFYIISSQLLCTSQNKGDPAV-LECLRDLSQVGSFDWATLGLAHLYHGLDVWTHGSGESN 234
L Y++ S + T+ P + L + + G + W L+ LY L + + +
Sbjct: 184 LLYLVGSTIFSTTTGNKVPVMYLPLFENFDRCGQYAWGAAALSFLYRALGNASLKTQSTI 243
Query: 235 WLFIRPLEVWSY 246
+ L+ WSY
Sbjct: 244 SGCLTLLQCWSY 255
>Glyma08g42390.2
Length = 685
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 56 ALMERWNDCTHTLVFGFGKMTLTPVDYAAITGLHFTGPVPPLDARYQTVAIGAQLVRSLL 115
AL+ERW T+T G+MT+T D A + GL G P + Y + + L
Sbjct: 86 ALVERWRRETNTFHLNVGEMTVTLKDVALLLGLAIDGE-PVIGITYTAC---SSVCEKYL 141
Query: 116 GVTTQTRYTVQGCMSYETVFRFWAERIRTRLEAWRELPEDVRPAAPAYTREERDQAAWSF 175
G + ++ YT G + + F++ PED AP E+ +A +
Sbjct: 142 GRSPESGYTSGGMVKLSWLKEFFS-----------RCPED----APLEVIEQHTRA---Y 183
Query: 176 LFYIISSQLLCTSQNKGDPAV-LECLRDLSQVGSFDWATLGLAHLYHGLDVWTHGSGESN 234
L Y++ S + T+ P + L + + G + W L+ LY L + + +
Sbjct: 184 LLYLVGSTIFSTTTGNKVPVMYLPLFENFDRCGQYAWGAAALSFLYRALGNASLKTQSTI 243
Query: 235 WLFIRPLEVWSY 246
+ L+ WSY
Sbjct: 244 SGCLTLLQCWSY 255