Jatropha Genome Database

JcCA0080751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080751.10 + phase: 2 /pseudo/partial
         (473 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g04880.1                                                       561   e-160
Glyma19g28350.1                                                       236   3e-62
Glyma19g28340.1                                                        72   2e-12
Glyma17g10280.1                                                        70   6e-12
Glyma05g01600.1                                                        70   7e-12

>Glyma16g04880.1 
          Length = 980

 Score =  561 bits (1446), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 286/436 (65%), Positives = 335/436 (76%), Gaps = 32/436 (7%)

Query: 37  QIQSEGYYLQLGVKDALLNALLVAAKRFSSGPPXXXXXXXXXXXXXXXXXXEHGKPIEQL 96
           +IQ+EGY LQLG KDALLNALL+A KRFS+GPP                   HG PIEQL
Sbjct: 72  KIQNEGYLLQLGAKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPIEQL 131

Query: 97  FYSLRTLQNQDDSNMAVLEMLTVLPEEVVDTQNADGNISPAHRSQYGQELLSHTPTVLEF 156
           FYSLR LQ+QDD N AVLEMLTVLPEE                      LLSHTP VLEF
Sbjct: 132 FYSLRNLQSQDDGNFAVLEMLTVLPEE----------------------LLSHTPMVLEF 169

Query: 157 LLEQSQKTYDGGIQLHERNRKVLRCLLSWVRAGCFSEIPQGSLPTHPLLNFVFNSLQVSS 216
           LL+QS+  +DG +Q HERNRK+LRCLLSWV+AGCFSEI  G+LP HPLLNF+FNSLQV  
Sbjct: 170 LLQQSETNFDGSVQQHERNRKILRCLLSWVKAGCFSEISPGTLPAHPLLNFLFNSLQVPL 229

Query: 217 SFDLAIEVLVELASRHEGLPQVLLCRVHFLKEVLLLPALNNGDEKIISGLACLMSEIGQA 276
           SFDLAIEVLVEL ++HEG+PQ+LLCRVH+LKEVLL PA + GD K++ GLACL+SEIGQA
Sbjct: 230 SFDLAIEVLVELVTKHEGVPQILLCRVHYLKEVLLFPARSRGDIKVMGGLACLLSEIGQA 289

Query: 277 APSLIVEASVEALALADSLLSCVAFPSEDWEIADSTLQFWSTLASYILSPDTESSKNGKH 336
           APSLIVEAS EALAL D+LLSCVAFPSEDWEIADSTLQFWSTLASYIL  D +  K+ K 
Sbjct: 290 APSLIVEASAEALALTDALLSCVAFPSEDWEIADSTLQFWSTLASYILGIDEDGVKSRKR 349

Query: 337 VEDVFFSVFSALLDALLLRAQVDESTFNDDSGMLDLPDGLVQFRMNLAELLVDICQLLRP 396
           VED+F  VFS LLD+LLLR+Q          G +DLPDGL+ FR+NL ELLVDIC LL  
Sbjct: 350 VEDIFSPVFSTLLDSLLLRSQ----------GRVDLPDGLIHFRVNLVELLVDICHLLGS 399

Query: 397 VTFVQKLFFGGWASVNIPVPWKEVEAKLFALNVVSEVVLQEAQTFDFSVIIQLATMLSIR 456
            TF+QKLF GGWAS N+ +PWKEVE+KLFALN V++V++Q+ Q++DFSV++QL TMLSI+
Sbjct: 400 ATFMQKLFIGGWASHNLSIPWKEVESKLFALNAVADVIIQDGQSYDFSVVMQLVTMLSIK 459

Query: 457 PSDKLKGFMCIVCQTV 472
           PSD LKGF+CIV +++
Sbjct: 460 PSDGLKGFICIVYRSL 475


>Glyma19g28350.1 
          Length = 259

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/192 (66%), Positives = 145/192 (75%), Gaps = 4/192 (2%)

Query: 37  QIQSEGYYLQLGVKDALLNALLVAAKRFSSGPPXXXXXXXXXXXXXXXXXXEHGKPIEQL 96
           +IQ+EGY LQLGVKDALLNALL+A KRFS+GPP                   HG PI+QL
Sbjct: 72  KIQNEGYLLQLGVKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPIKQL 131

Query: 97  FYSLRTLQNQDDSNMAVLEMLTVLPEEVVDTQNADGNISPAHRSQYGQELLSHTPTVLEF 156
           FYSLR LQ+QDD N+AVLEMLTVLPEEVVD Q+ D  IS    +     LLSHTP VLEF
Sbjct: 132 FYSLRNLQSQDDDNIAVLEMLTVLPEEVVDNQHIDSKISLGTFAL----LLSHTPMVLEF 187

Query: 157 LLEQSQKTYDGGIQLHERNRKVLRCLLSWVRAGCFSEIPQGSLPTHPLLNFVFNSLQVSS 216
           LL+QS+  +DG +Q HERNRK+LRCLLSWV+AGCFSEI  G+LP HPLLNF+FNSLQV  
Sbjct: 188 LLQQSETNFDGSVQQHERNRKILRCLLSWVKAGCFSEISPGTLPAHPLLNFLFNSLQVPL 247

Query: 217 SFDLAIEVLVEL 228
           SFDLAIEVLVEL
Sbjct: 248 SFDLAIEVLVEL 259


>Glyma19g28340.1 
          Length = 46

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 39/46 (84%)

Query: 357 QVDESTFNDDSGMLDLPDGLVQFRMNLAELLVDICQLLRPVTFVQK 402
           QVD+ST+ND+ G++DLPDGL+ FR+NL ELLVDIC LL   TF+QK
Sbjct: 1   QVDDSTYNDEGGVVDLPDGLIHFRVNLVELLVDICHLLGSATFMQK 46


>Glyma17g10280.1 
          Length = 960

 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 150/347 (43%), Gaps = 49/347 (14%)

Query: 114 LEMLTVLPEEVVDTQNADGNISPAHRSQYGQELLSHTPTVLEFLLEQSQKTYDGGIQLHE 173
           LE+LTVLPEEV++ + A     P  R Q+ +EL S     L  L           + + E
Sbjct: 145 LELLTVLPEEVLNYKIA---ARPERRRQFEKELTSQMEIALNIL--------TACLSISE 193

Query: 174 RNRKVLRCLLSWVRAGCFSEIPQGSLPTHPLLNFVFNSLQVSSSFDLAIEVLVEL----- 228
              +VL    SW+R      IP   L +HPL+    +SL      + ++ V+ EL     
Sbjct: 194 LKEQVLEAFASWLRLK--HGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTT 251

Query: 229 ------ASRHEGLPQVLLCRVHFLKEVLLLPALNNGDEKIISGLACLMSEIGQAAPSLIV 282
                  S +  L QV++ +V  LK  L     +  DE+ +  +A L +++G +   LI 
Sbjct: 252 AGNIDGVSANMPLIQVIVPQVMNLKVQL---GDSTKDEEDVKAIARLFADMGDSYVELIA 308

Query: 283 EASVEALALADSLLSCVAFPSEDWEIADSTLQFWSTL-------ASYILSPD---TESSK 332
             S E++ +  +LL   + P  +++IA  T  FW +L        SYI   +    E+ +
Sbjct: 309 TGSDESMLIVHALLEVASHP--EYDIASMTFNFWHSLQLNLTKRESYISYGNEACIEAER 366

Query: 333 NGKHVEDVFFSVFSALLDALLLRAQVDESTFNDDSGMLDLPDGLVQFRMNLAELLVDICQ 392
           N +    VF   + +L+  ++ R Q  E     D    DL +   Q +  +A++L D   
Sbjct: 367 NRRL--QVFRPAYESLVSLVIFRVQYPEDY--QDLSYEDLKE-FKQTKYAVADVLTDASS 421

Query: 393 LLRPVTFVQKLFFGGWASV-----NIPVPWKEVEAKLFALNVVSEVV 434
           +L     ++ L+     +V     N    W   EA LF +  +S  V
Sbjct: 422 VLGGDATLKILYMKLLEAVSGHGNNEHKEWCPAEAALFCIRAISNYV 468


>Glyma05g01600.1 
          Length = 959

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 151/346 (43%), Gaps = 48/346 (13%)

Query: 114 LEMLTVLPEEVVDTQNADGNISPAHRSQYGQELLSHTPTVLEFLLEQSQKTYDGGIQLHE 173
           LE+LTVLPEEV++ + A     P  R Q+ +EL S         +E S       + + E
Sbjct: 145 LELLTVLPEEVLNYKIA---ARPERRRQFEKELTSQ--------MEVSLNILTACLSISE 193

Query: 174 RNRKVLRCLLSWVRAGCFSEIPQGSLPTHPLLNFVFNSLQVSSSFDLAIEVLVEL----- 228
              +VL    SW+R      IP   L +HPL+    +SL      + ++ V+ EL     
Sbjct: 194 LKEQVLEAFASWLRLK--HGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTT 251

Query: 229 -----ASRHEGLPQVLLCRVHFLKEVLLLPALNNGDEKIISGLACLMSEIGQAAPSLIVE 283
                 S +  L QV++  V  LK  L   + +  DE+ +  +A L +++G +   LI  
Sbjct: 252 AGDIDVSANMPLIQVIVPHVMNLKAQL---SDSTKDEEDVKAIARLFADMGDSYVELIAT 308

Query: 284 ASVEALALADSLLSCVAFPSEDWEIADSTLQFWSTL-------ASYILSPD---TESSKN 333
            S E++ +  +LL   +    +++IA  T  FW +L        SYI   +    E+ +N
Sbjct: 309 GSDESMLIVHALLEVASHA--EYDIASMTFNFWHSLQLNLTKRESYISYGNETCIEAERN 366

Query: 334 GKHVEDVFFSVFSALLDALLLRAQVDESTFNDDSGMLDLPDGLVQFRMNLAELLVDICQL 393
            +    VF   + +L+  ++ R Q  E     D    DL +   Q +  +A++L D   +
Sbjct: 367 RRL--HVFRPAYESLVSLVIFRVQYPEDY--QDLSYEDLKE-FKQTKYAVADVLTDASSV 421

Query: 394 LRPVTFVQKLFFGGWASV-----NIPVPWKEVEAKLFALNVVSEVV 434
           L     ++ L+     +V     N    W+  EA LF +  +S  V
Sbjct: 422 LGGDATLKILYMKLLEAVSGHGNNEHKEWRPAEAALFCIRAISNYV 467