Jatropha Genome Database

JcCA0080591.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080591.30 - phase: 0 
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09120.1                                                        96   4e-20
Glyma05g26180.1                                                        95   8e-20
Glyma05g26180.2                                                        95   1e-19
Glyma09g38840.1                                                        87   2e-17
Glyma09g38840.2                                                        86   4e-17

>Glyma08g09120.1 
          Length = 2212

 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 101  NLMMKMSNASR---KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
            N+MM+  + S    K +   D W E+ELD LWIGVRRHG+GNW+AMLRDP L FSK+KT 
Sbjct: 1708 NIMMRTGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTS 1767

Query: 158  EDLSRRWEKERLKILYPGNLPIHGS 182
            EDLS RWE+E++K+      P   S
Sbjct: 1768 EDLSVRWEEEQVKVFQGPPFPAQRS 1792


>Glyma05g26180.1 
          Length = 2340

 Score = 95.1 bits (235), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 101  NLMMKMSNASR---KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
            N+MM+  + S    K +   D W E+ELD LWIGVRRHG+GNW+AMLRDP L FSK+KT 
Sbjct: 1812 NIMMRTGSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTS 1871

Query: 158  EDLSRRWEKERLKILYPGNLPIHGS 182
            EDLS RWE+E++K+      P   S
Sbjct: 1872 EDLSVRWEEEQVKVFQGPPFPAQRS 1896


>Glyma05g26180.2 
          Length = 1683

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 101  NLMMKMSNASR---KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
            N+MM+  + S    K +   D W E+ELD LWIGVRRHG+GNW+AMLRDP L FSK+KT 
Sbjct: 1155 NIMMRTGSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTS 1214

Query: 158  EDLSRRWEKERLKILYPGNLPIHGS 182
            EDLS RWE+E++K+      P   S
Sbjct: 1215 EDLSVRWEEEQVKVFQGPPFPAQRS 1239


>Glyma09g38840.1 
          Length = 856

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 47/60 (78%)

Query: 119 VWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKILYPGNLP 178
           +W EEELDFLWIGVRRHG+GNW+AMLRDP L FS  +   DL+ RWE E+LK+L   ++P
Sbjct: 585 MWSEEELDFLWIGVRRHGRGNWDAMLRDPRLWFSPLRVPGDLAERWEDEQLKLLNDISVP 644


>Glyma09g38840.2 
          Length = 627

 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 47/60 (78%)

Query: 119 VWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKILYPGNLP 178
           +W EEELDFLWIGVRRHG+GNW+AMLRDP L FS  +   DL+ RWE E+LK+L   ++P
Sbjct: 343 MWSEEELDFLWIGVRRHGRGNWDAMLRDPRLWFSPLRVPGDLAERWEDEQLKLLNDISVP 402