Jatropha Genome Database

JcCA0080501.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080501.40 - phase: 0 
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g15250.1                                                       302   2e-82
Glyma02g18080.1                                                       211   4e-55
Glyma10g15650.1                                                       124   8e-29

>Glyma10g15250.1 
          Length = 228

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 158/210 (75%), Positives = 175/210 (83%), Gaps = 5/210 (2%)

Query: 25  STPVGHPLFSRIRLATPADVPHIHKLIHQMAVFERLTHLFSATESSLSATLFTSPPFHSF 84
           S P   PLF+RIRLATP+DVPHIHKLIHQMAVFERLTHLFSATESSLS+TLFTSPPF SF
Sbjct: 19  SLPETTPLFTRIRLATPSDVPHIHKLIHQMAVFERLTHLFSATESSLSSTLFTSPPFQSF 78

Query: 85  TIFLLEVSSNPLPKITSH----FAPIDRIIQLDHPINDPETETFKNGSDDVVVAGFVLFF 140
           T+ LLE S  P    T +    + PI +++ L +PINDPE++TFK   D V V GFVLFF
Sbjct: 79  TVLLLEASPTPFLNSTLNPNPFYKPITKLLNLSNPINDPESDTFKT-LDGVTVVGFVLFF 137

Query: 141 PNYSTFLGKPGFYVEDLFVRECYRRKGLGRMLLSAVAGQAVKMGYGRVEWVVLDWNVNAI 200
           PNYSTFLGKPGFYVEDLFVRECYRRKG GRMLLSAVA QAVKM YGRVEWVVLDWNVNAI
Sbjct: 138 PNYSTFLGKPGFYVEDLFVRECYRRKGFGRMLLSAVAKQAVKMEYGRVEWVVLDWNVNAI 197

Query: 201 KFYEEMGAKVLPEWRICRLTGENLEAYRDA 230
           +FY+EMGA+VL EWR+CRLTGE L+AY  A
Sbjct: 198 RFYQEMGAEVLNEWRVCRLTGEALQAYGGA 227


>Glyma02g18080.1 
          Length = 225

 Score =  211 bits (538), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/197 (61%), Positives = 137/197 (69%), Gaps = 15/197 (7%)

Query: 32  LFSRIRLATPADVPHIHKLIHQMAVFERLTHLFSATESSLSATLFTSPPFHSFTIFLLEV 91
           LF+RI LAT +DVPHIHKLIHQM +F+ LTHLFSATESSLS+TLFTSPPF SFTI LLE 
Sbjct: 26  LFARIHLATLSDVPHIHKLIHQMVIFKPLTHLFSATESSLSSTLFTSPPFQSFTILLLEA 85

Query: 92  SSNPLPKITSHFAPIDRIIQLDHPINDPETETFKNGSDDVVVAGFVLFFPNYSTFLG--- 148
           S  P P  T            +   + P   +F + +   +  G     P   T L    
Sbjct: 86  SPTPFPFTTP-----------NKNTDTPPPSSFTSPTPSKITRG-TFSKPTAMTLLLLGL 133

Query: 149 KPGFYVEDLFVRECYRRKGLGRMLLSAVAGQAVKMGYGRVEWVVLDWNVNAIKFYEEMGA 208
           KPGFYVE LFVRECYRRKG GRMLLSAV  QAVKMGYGRV+WVVLDWNVN I+F EEMGA
Sbjct: 134 KPGFYVEGLFVRECYRRKGFGRMLLSAVTKQAVKMGYGRVDWVVLDWNVNTIRFDEEMGA 193

Query: 209 KVLPEWRICRLTGENLE 225
           +VL EWR CRLTGE L+
Sbjct: 194 EVLNEWRGCRLTGEALQ 210


>Glyma10g15650.1 
          Length = 96

 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query: 129 DDVVVAGFVLFFPNYSTFLGKPGFYVEDLFVRECYRRKGLGRMLLSAVAGQAVKMGYGRV 188
             V + GFVLFFPN+S  L K GFY+E+LF+RECY+ KGLGRMLLSAVA QA+KMG  RV
Sbjct: 10  KGVSIVGFVLFFPNFSLVLEKRGFYMENLFLRECYKTKGLGRMLLSAVAKQALKMGCKRV 69

Query: 189 EWVVLDWNVNAIKFYEEMGAKVLPEW 214
           +WV+LDWNV  IKFYE+MGA  + E+
Sbjct: 70  KWVMLDWNVLTIKFYEKMGANFIEEY 95