Jatropha Genome Database

JcCA0079261.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079261.20 + phase: 0 
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g36340.1                                                       135   3e-32
Glyma12g34210.1                                                       132   3e-31
Glyma06g42020.1                                                        87   2e-17
Glyma11g00530.1                                                        55   3e-08
Glyma10g39850.1                                                        55   4e-08
Glyma20g27840.1                                                        53   3e-07
Glyma10g26250.1                                                        52   3e-07

>Glyma13g36340.1 
          Length = 222

 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 108/182 (59%), Gaps = 15/182 (8%)

Query: 8   CCNFTVGLVIA----ALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNT------TLFF 57
           CC+  +G +IA    ALF+W      +PKC+L  IYVPALN++ NS SN+      T+ F
Sbjct: 8   CCSRCIGFLIAIGLTALFLWLSLRVDEPKCYLDYIYVPALNKTLNSSSNSTHNKNATIVF 67

Query: 58  QLKLENTNIVKGVYYDPVNVTF--FDSPNRTHSIGNFTIPKFYQGRNKKAIKSGEINDTG 115
            LKL N N  KG+ YD V ++F  F+S N T  +GN T+ +FYQG  KKA K G  N T 
Sbjct: 68  ALKLANENKDKGIQYDDVLLSFRVFESVNTTRPLGNATVERFYQGHKKKATKRG--NFTV 125

Query: 116 LDIEAVLRAVSNGSVVFRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQGTQVNPRKGV 175
                 L A  +G V +RVD AT+V+ K + + TKR R+  GA V +   GT+VN RK V
Sbjct: 126 GGGGGNLTAALDGKVWYRVDYATAVKYKIIFWYTKRHRLWGGANVEIGELGTKVN-RKAV 184

Query: 176 RL 177
           RL
Sbjct: 185 RL 186


>Glyma12g34210.1 
          Length = 217

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 106/177 (59%), Gaps = 11/177 (6%)

Query: 7   KCCNFTVGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPS----NTTLFFQLKLE 62
           +C  F + + + ALF+W      +PKC+L  IYVPALN++ NS S    NTT+ F LKL 
Sbjct: 11  RCVTFLITIGLTALFLWLSLRVDEPKCYLDYIYVPALNKTLNSNSTHNKNTTILFALKLT 70

Query: 63  NTNIVKGVYYDPVNVTF--FDSPNRTHSIGNFTIPKFYQGRNKKAIKSGEINDTGLDIEA 120
           N N  KG+ YD V ++F  F+S N T  +GN T+ +FYQG  KKA K G  +  G ++ A
Sbjct: 71  NGNKDKGIQYDDVLLSFRVFESVNLTRPLGNATVQRFYQGHQKKATKHGNFSGGGGNLTA 130

Query: 121 VLRAVSNGSVVFRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQGTQVNPRKGVRL 177
            +     G + +RVD AT+V+ K + + TKR R+  GA V + + G +V  RK VRL
Sbjct: 131 AVA----GRMWYRVDYATAVKYKILFWYTKRHRLWGGANVEIGDSGMKVY-RKAVRL 182


>Glyma06g42020.1 
          Length = 177

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 87/168 (51%), Gaps = 15/168 (8%)

Query: 6   CKCCNFTV-GLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENT 64
           C+CC  T+  L + A F+W    T+ PKC LQ +Y+P+   +S    N TLFF L L+N 
Sbjct: 7   CRCCFGTLLSLGLTAAFLWLTLRTSPPKCTLQSLYLPSF--TSPHHKNDTLFFNLSLQND 64

Query: 65  NIVKGVYYDPVNVTF--FDSPNRTHSIGNFTIPKFYQGRNKKAIK--SGEINDTGLDI-- 118
           N  K + Y  V  TF  F     T  + N T+  FYQGR+K   K  S  +   G  I  
Sbjct: 65  NKDKSIKYGAVLFTFAIFLDNTTTRPLANATLEPFYQGRSKTTRKWGSARVPRDGRAIAN 124

Query: 119 ---EAVLRAVSNGSVVFRVDMATSVRNK-FVVFKTKRRRINVGAYVNV 162
              +A +R  +NG V  RV+  T VR K + +F  KR+R+  GA V V
Sbjct: 125 RSADATVR--NNGKVFVRVEFRTRVRYKIWTLFYVKRQRLVGGANVEV 170


>Glyma11g00530.1 
          Length = 174

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 8/155 (5%)

Query: 13  VGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENTNIVKGVYY 72
           +GL++  L++  R     PK     I   ++   SNS  N T+F+ L++EN N    +YY
Sbjct: 2   LGLIVLCLWLALR-----PKNPSYSIMFISIQHPSNSSENCTIFYSLQIENPNKDSSIYY 56

Query: 73  DPVNVTF-FDSPNRTHSIGNFTIPKFYQGRNKKAIKSGEINDTGLDIEAVLRAVSNGSVV 131
           D   ++F +  P     +G  TI  F+QG       S  +N      + +  A+SN +  
Sbjct: 57  DKTILSFLYGEPE--DEVGETTIVPFHQGTGNTRDVSDTVNAKPRPFKPLFSAISNATTE 114

Query: 132 FRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQG 166
            +V + T  R K    K+K   + +   + + + G
Sbjct: 115 LKVALITRYRYKTWGIKSKFHGLQLKGILPIDSDG 149


>Glyma10g39850.1 
          Length = 227

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 14/173 (8%)

Query: 11  FTVGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENTNIVKGV 70
           F VGL+     +W      +P+  +QE  +P L Q+S    N  + F++   N+N   GV
Sbjct: 56  FIVGLI--TFILWLSLRPHRPRFHIQEFNLPGLTQNSGF-ENAVITFKVSARNSNQNIGV 112

Query: 71  YYDPVNVTFFDSPNRTHSIGN--FTIPKFYQGRNKKAIKSGEINDTGLDIEAVLRAV--- 125
           YY+ ++   +    R   IG+     P + Q +N   +  G+++   L + +   +    
Sbjct: 113 YYESMDGAVY---YRDQKIGSKPLLYPFYQQPKNTTEV-DGDLSGATLTVSSQRWSEFQS 168

Query: 126 --SNGSVVFRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQGTQVNPRKGVR 176
             ++GSVVFR+++ + +R K   + +KR  ++    V V   G+ +   K  R
Sbjct: 169 DRADGSVVFRLELTSVIRFKISTWDSKRHTMHANCNVGVGPDGSLLTLYKDKR 221


>Glyma20g27840.1 
          Length = 227

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 11  FTVGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENTNIVKGV 70
           F VGL+     +W      +P+  + E  +P L Q S    N  + F++   N+N   GV
Sbjct: 56  FIVGLI--TFILWLSLRPHRPRFHIHEFNIPGLTQDSGF-ENAVITFKVSARNSNQNIGV 112

Query: 71  YYDPVNVTFFDSPNRTHSIG--NFTIPKFYQGRNKKAIKSGEINDTGLDIEAVLRAV--- 125
           YY+ ++   +    R   IG      P + Q +N   +  G+++   L + +   +    
Sbjct: 113 YYESMDGAVY---YRDTKIGYTPLLYPFYQQPKNTTEV-DGDLSGATLTVSSQRWSEFQS 168

Query: 126 --SNGSVVFRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQGTQVNPRKGVR 176
             ++GSVVFR+++ + +R K   + +KR  ++    V V   G+ +   K  R
Sbjct: 169 DRADGSVVFRLELTSVIRFKISTWDSKRHTMHANCNVGVGPDGSLLTIYKDKR 221


>Glyma10g26250.1 
          Length = 175

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 43/143 (30%)

Query: 22  MWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENTNIVKGVYYDPVNVTF-- 79
           +W      +P+ ++  IY                     L N N+  GV YD VN++F  
Sbjct: 26  LWPTLLVKQPRLYIDYIY---------------------LVNRNMGWGVQYDNVNLSFEA 64

Query: 80  FDSPNRTHSIGNFTIPKFYQGRNKKAIKSGEINDTGLDIEAVLRAVSNGSVV-----FRV 134
           F  PN T  +GN T+  FYQGR ++ +K G            L + + G +      +RV
Sbjct: 65  FVGPNSTRPLGNATLEGFYQGRWREGLKHGSF----------LASATTGKLTTVLSFWRV 114

Query: 135 DMATSVRNKFVVFKTKRRRINVG 157
           D AT+V+     +K  + R+ +G
Sbjct: 115 DFATAVK-----YKKGKYRVWLG 132