Jatropha Genome Database

JcCA0078541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078541.10 + phase: 0 /partial
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39140.1                                                       473   e-133
Glyma11g33160.1                                                       461   e-130
Glyma02g40810.1                                                       422   e-118
Glyma06g00430.1                                                       159   2e-39
Glyma15g18680.1                                                       105   7e-23

>Glyma14g39140.1 
          Length = 469

 Score =  473 bits (1216), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/279 (82%), Positives = 243/279 (87%)

Query: 1   MAAATDKLTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTDEVVVPY 60
           MA A +KL+ LKSAVAGLN+ISENEKNGFISLV RYLSGEAQHV+WSKIQTPTDEVVVPY
Sbjct: 1   MATAAEKLSALKSAVAGLNEISENEKNGFISLVGRYLSGEAQHVEWSKIQTPTDEVVVPY 60

Query: 61  DTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIEH 120
           DTLAP P+  +E                    MGCTGPKSVIEVR+GLTFLDLIVIQIE+
Sbjct: 61  DTLAPTPEGSSEVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIEN 120

Query: 121 LNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPLPCKG 180
           LNSKYG NVPLLLMNSFNTHDDTQKI+EKY  SN+EIHTFNQSQYPR+VVEDF PLP KG
Sbjct: 121 LNSKYGSNVPLLLMNSFNTHDDTQKIVEKYQNSNIEIHTFNQSQYPRLVVEDFLPLPSKG 180

Query: 181 QTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRNK 240
            T KDGWYPPGHGDVFPSL NSGKLD LLSQGKEYVFVANSDNLGAIVDLKIL+HLI+NK
Sbjct: 181 HTDKDGWYPPGHGDVFPSLLNSGKLDALLSQGKEYVFVANSDNLGAIVDLKILNHLIQNK 240

Query: 241 NEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH 279
           NEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEH
Sbjct: 241 NEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEH 279


>Glyma11g33160.1 
          Length = 475

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/285 (78%), Positives = 242/285 (84%), Gaps = 6/285 (2%)

Query: 1   MAAAT------DKLTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTD 54
           MA AT      DKL+ LKS+VA L+QISENEKNGF SLVARYLSGEAQHV+WSKI+TPTD
Sbjct: 1   MATATLSPADADKLSNLKSSVAALSQISENEKNGFTSLVARYLSGEAQHVEWSKIETPTD 60

Query: 55  EVVVPYDTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLI 114
           EVVVPYD+LAP PD   E                    MGCTGPKSVIEVR+GLTFLDLI
Sbjct: 61  EVVVPYDSLAPTPDGSLEVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLI 120

Query: 115 VIQIEHLNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFT 174
           V+QIE+LNSKYG NVPLLLMNSFNTHDDTQKI+EKY  SN+EIHTFNQSQYPR+VV+DF 
Sbjct: 121 VVQIENLNSKYGSNVPLLLMNSFNTHDDTQKIVEKYKNSNIEIHTFNQSQYPRLVVDDFL 180

Query: 175 PLPCKGQTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILS 234
           P P KGQTG+DGWYPPGHGDVFPSL NSGKLD LLSQGKEYVFVANSDNLGA+VDLKIL+
Sbjct: 181 PFPSKGQTGRDGWYPPGHGDVFPSLVNSGKLDVLLSQGKEYVFVANSDNLGAVVDLKILN 240

Query: 235 HLIRNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH 279
           HLI +KNEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEH
Sbjct: 241 HLIEHKNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEH 285


>Glyma02g40810.1 
          Length = 514

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/325 (68%), Positives = 237/325 (72%), Gaps = 48/325 (14%)

Query: 1   MAAATDKLTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTDEVVVPY 60
           M  AT+KL+ LKSAVAGLN+ISE+EKNGFISLV+RYLSGEAQHV+WSKIQTPTDEVVVPY
Sbjct: 1   MTTATEKLSALKSAVAGLNEISESEKNGFISLVSRYLSGEAQHVEWSKIQTPTDEVVVPY 60

Query: 61  DTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIEH 120
           DTLAP PD  ++                    MGCTGPKSVIEVR+GLTFLDLIVIQIE+
Sbjct: 61  DTLAPTPDGSSDVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIEN 120

Query: 121 LNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPLPCKG 180
           LNSKYG NVPLLLMNSFNTHDDTQKI+EKY  SN+EIHTFNQSQYPR+V EDF PLP KG
Sbjct: 121 LNSKYGSNVPLLLMNSFNTHDDTQKIVEKYQNSNIEIHTFNQSQYPRLVAEDFLPLPSKG 180

Query: 181 QTGKDG---------WYPP-------------------------------------GHGD 194
            T KDG         W                                         HGD
Sbjct: 181 HTDKDGCLEYLVYMHWSVIDDMQTSSMVIFSISLDQSHVLFMDLYLIFAQCSGTLLAHGD 240

Query: 195 VFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRNKNEYCMEVTPKTLAD 254
           VFPSL NSGKLD LLSQGKEYVFVANSDNLGAIVDLKIL+HLI+NKNEYCMEVTPKTLAD
Sbjct: 241 VFPSLLNSGKLDALLSQGKEYVFVANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLAD 300

Query: 255 VKGGTLISYEGKVQLLEIAQVPDEH 279
           VKGGTLISYEG+  LLEIAQVPDEH
Sbjct: 301 VKGGTLISYEGR--LLEIAQVPDEH 323


>Glyma06g00430.1 
          Length = 616

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/226 (43%), Positives = 122/226 (53%), Gaps = 12/226 (5%)

Query: 54  DEVVVPYDTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDL 113
           D  VV YD LAP+P D  E                    M   GPKS I++ +GLT+LDL
Sbjct: 228 DVTVVLYDNLAPLPQDIEETKKLLDKLVVLKFNGSQGRNMCFDGPKSAIDICDGLTYLDL 287

Query: 114 IVIQIEHLNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDF 173
           I+ QIE LNSKYG  VPLLL N  + HD + K++EKYSKS+VE+HTF Q        ED 
Sbjct: 288 IINQIETLNSKYGSRVPLLLFNKDDIHDSSLKVLEKYSKSSVEVHTFKQG-------EDR 340

Query: 174 TPLPCKGQTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKIL 233
                     K+  +P    DVF  L   G LD+LLSQGKEY+ V  SDN+  ++D  IL
Sbjct: 341 ELKSLGEYYSKEEVHPFDDVDVFRLLMTGGTLDSLLSQGKEYILVLKSDNVATVLDPNIL 400

Query: 234 SHLIRNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH 279
           +HL+ N  EYCMEVTP          L+    K +L EI    D+H
Sbjct: 401 NHLMINDIEYCMEVTPSN-----SFNLMLPTTKFKLREIGGDQDKH 441


>Glyma15g18680.1 
          Length = 342

 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 79/153 (51%), Gaps = 30/153 (19%)

Query: 145 KIIEKYSKSNVEIHTFNQSQYPRIVVE-----DFTPLPCKGQTGKDGWYPPGHGDVFPSL 199
           K+I    K  V  +  N S++  + V       F  +   GQT KD WYPP HG VFPSL
Sbjct: 28  KVISVNGKLMVSSYGLNSSKFKNLTVYLVFYLIFCCMDSNGQTSKDRWYPPSHGVVFPSL 87

Query: 200 KNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRNKNEYCMEVTPKTLADVKGGT 259
                       GK+YVF  NSDNLG +VDL     L  NK    +++   TLADVKGGT
Sbjct: 88  ------------GKKYVFFVNSDNLGVVVDLSKERLLFSNKCILALDLHIDTLADVKGGT 135

Query: 260 LISYEGKV-------------QLLEIAQVPDEH 279
           +ISY+G+V             QL EIAQV DEH
Sbjct: 136 VISYKGRVQASNVSLIFDCLMQLFEIAQVSDEH 168