Jatropha Genome Database

JcCA0078521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078521.10 - phase: 0 /pseudo/partial
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27220.2                                                       344   6e-95
Glyma16g27220.1                                                       344   6e-95
Glyma16g27220.3                                                       343   2e-94
Glyma06g11640.1                                                        53   4e-07
Glyma04g43080.1                                                        51   1e-06

>Glyma16g27220.2 
          Length = 424

 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 185/217 (85%), Gaps = 11/217 (5%)

Query: 1   IVPLSPILPFEVLSAKLGRKPEDIIKLDANENPYGPPPEVFEALGSLKFPYIYPDPQSRG 60
           + P  PILPFEVLSA+LGRKPEDI+KLDANENPYGPPPEV EALGS++FPY+YPDP+SR 
Sbjct: 75  LAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSMQFPYVYPDPESRR 134

Query: 61  LREALAQDSGLESDYILVGI-----------CTLDPGDKIVDCPPTFTMYQFDAAVNGAE 109
           LR ALA DSGLE++YIL G            C LDPGDKIVDCPPTFTMY+FDAAVNGA 
Sbjct: 135 LRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAL 194

Query: 110 VIKVLRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDLPILVVLD 169
           VIKV R+PDFSLNVE I++VV+QE PKCIFLTSPNNPDGSII+DE LLKIL+LPILV+LD
Sbjct: 195 VIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDEVLLKILELPILVILD 254

Query: 170 EAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAAFGEL 206
           EAYIEFS +ESRM WVKKHDNLIVLRTFSKRA    L
Sbjct: 255 EAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGL 291


>Glyma16g27220.1 
          Length = 424

 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 185/217 (85%), Gaps = 11/217 (5%)

Query: 1   IVPLSPILPFEVLSAKLGRKPEDIIKLDANENPYGPPPEVFEALGSLKFPYIYPDPQSRG 60
           + P  PILPFEVLSA+LGRKPEDI+KLDANENPYGPPPEV EALGS++FPY+YPDP+SR 
Sbjct: 75  LAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSMQFPYVYPDPESRR 134

Query: 61  LREALAQDSGLESDYILVGI-----------CTLDPGDKIVDCPPTFTMYQFDAAVNGAE 109
           LR ALA DSGLE++YIL G            C LDPGDKIVDCPPTFTMY+FDAAVNGA 
Sbjct: 135 LRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAL 194

Query: 110 VIKVLRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDLPILVVLD 169
           VIKV R+PDFSLNVE I++VV+QE PKCIFLTSPNNPDGSII+DE LLKIL+LPILV+LD
Sbjct: 195 VIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDEVLLKILELPILVILD 254

Query: 170 EAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAAFGEL 206
           EAYIEFS +ESRM WVKKHDNLIVLRTFSKRA    L
Sbjct: 255 EAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGL 291


>Glyma16g27220.3 
          Length = 342

 Score =  343 bits (879), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 185/217 (85%), Gaps = 11/217 (5%)

Query: 1   IVPLSPILPFEVLSAKLGRKPEDIIKLDANENPYGPPPEVFEALGSLKFPYIYPDPQSRG 60
           + P  PILPFEVLSA+LGRKPEDI+KLDANENPYGPPPEV EALGS++FPY+YPDP+SR 
Sbjct: 75  LAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSMQFPYVYPDPESRR 134

Query: 61  LREALAQDSGLESDYILVGI-----------CTLDPGDKIVDCPPTFTMYQFDAAVNGAE 109
           LR ALA DSGLE++YIL G            C LDPGDKIVDCPPTFTMY+FDAAVNGA 
Sbjct: 135 LRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAL 194

Query: 110 VIKVLRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDLPILVVLD 169
           VIKV R+PDFSLNVE I++VV+QE PKCIFLTSPNNPDGSII+DE LLKIL+LPILV+LD
Sbjct: 195 VIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDEVLLKILELPILVILD 254

Query: 170 EAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAAFGEL 206
           EAYIEFS +ESRM WVKKHDNLIVLRTFSKRA    L
Sbjct: 255 EAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGL 291


>Glyma06g11640.1 
          Length = 439

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 20/132 (15%)

Query: 60  GLREALAQDSGL----ESDYILVGICT----------LDPGDKIVDCPPTFTMYQFDAAV 105
            + E   +D+GL    E +  +   CT          ++PGD+++   P +  Y+   ++
Sbjct: 125 AIAERFKKDTGLVVDPEKEITVTSGCTEAIAATMIGLINPGDEVIMFAPFYDSYEATLSM 184

Query: 106 NGAEVIKV-LRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDL-- 162
            GA+V  + LR PDF++ +E +   + + N + I + +P+NP G +   E+L  I  L  
Sbjct: 185 AGAKVKGITLRPPDFAVPLEELKSTISK-NTRAILINTPHNPTGKMFTREELNCIASLCI 243

Query: 163 --PILVVLDEAY 172
              +LV  DE Y
Sbjct: 244 ENDVLVFTDEVY 255


>Glyma04g43080.1 
          Length = 450

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 16/120 (13%)

Query: 58  SRGLREALAQDSGLESDYILVGICTLDPGDKIVDCPPTFTMYQFDAAVNGAEVIKV-LRK 116
           + G  EA+A          ++G+  ++PGD+++   P +  Y+   ++ GA+V  + LR 
Sbjct: 158 TSGCTEAIAA--------TMIGL--INPGDEVIMFAPFYDSYEATLSMAGAKVKGITLRP 207

Query: 117 PDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDL----PILVVLDEAY 172
           PDF++ +E +   + + N + I + +P+NP G +   E+L  I  L     +LV  DE Y
Sbjct: 208 PDFAVPLEELKSTISK-NTRAILINTPHNPTGKMFTREELNCIASLCIENDVLVFTDEVY 266