Jatropha Genome Database

JcCA0078491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078491.20 - phase: 0 
         (221 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g35800.1                                                       296   1e-80
Glyma14g09380.1                                                       293   7e-80
Glyma02g07250.1                                                        84   9e-17
Glyma16g26210.1                                                        84   1e-16

>Glyma17g35800.1 
          Length = 483

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 139/185 (75%), Positives = 159/185 (85%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRST+VYFKHNDM+SL+  LE +TA+ K+AK LRRYI++EAVYQNS
Sbjct: 199 DEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITAKYKKAKNLRRYIVIEAVYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           G+IAPLDEII+LKEKY FRVLL+ESNS+GVLG SG+GLTEY GVPVEKIDIITA+MGHAL
Sbjct: 259 GEIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEYCGVPVEKIDIITASMGHAL 318

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG+ R+IDHQRLSSSGY F            ITAIDV+E+NP L+ KLK+NIA
Sbjct: 319 ATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLIKKLKKNIA 378

Query: 215 VLWKG 219
            L KG
Sbjct: 379 FLRKG 383


>Glyma14g09380.1 
          Length = 483

 Score =  293 bits (751), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 138/185 (74%), Positives = 158/185 (85%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRST+VYFKHNDM++L+  LE +T++ K+ K LRRYI+VEAVYQNS
Sbjct: 199 DEGVHWGIQNGLYLSRSTVVYFKHNDMDALRETLENITSKYKKTKNLRRYIVVEAVYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           GQIAPLDEII+LKEKY FRVLL+ESNS+GVLG SG+GLTE+ GVPVEKIDIITAAMGHAL
Sbjct: 259 GQIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEHCGVPVEKIDIITAAMGHAL 318

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG+ R+IDHQRLSSSGY F            ITAIDV+E+NP L+ KLK+NIA
Sbjct: 319 ATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLIKKLKKNIA 378

Query: 215 VLWKG 219
            L KG
Sbjct: 379 FLRKG 383


>Glyma02g07250.1 
          Length = 489

 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 7/166 (4%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRA-----KKLRRYIIVEAVYQN 93
           H  I NG   S +TI  F+HN+   L+ VL +  AE +       KK+   ++VE +Y  
Sbjct: 195 HNSIVNGARGSGATIRVFQHNEPSHLEEVLREQIAEGQPRTHRPWKKI--MVVVEGIYSM 252

Query: 94  SGQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHA 153
            G++  L E+I + +KY     L+E++SIG +G+SG+G+ E  GV    +DI+      +
Sbjct: 253 EGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKS 312

Query: 154 LATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
             + GG+  G+  +I H + +   + +            I++I VI
Sbjct: 313 FGSCGGYIAGSKDLIQHLKYACPAHLYATSISPPAAQQIISSIRVI 358


>Glyma16g26210.1 
          Length = 490

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 7/166 (4%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRA-----KKLRRYIIVEAVYQN 93
           H  I NG   S +TI  F+HN+   L+ VL +  AE +       KK+   +IVE +Y  
Sbjct: 195 HNSIVNGARGSGATIRVFQHNEPSHLEEVLREQIAEGQPRTHRPWKKI--MVIVEGIYSM 252

Query: 94  SGQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHA 153
            G++  L E+I + +KY     L+E++SIG +G++G+G+ E  GV    +DI+      +
Sbjct: 253 EGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKS 312

Query: 154 LATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
             + GG+  G+  +I H + +   + +            I++I VI
Sbjct: 313 FGSCGGYIAGSKDLIQHLKYTCPAHLYATSISPPAAQQIISSIRVI 358