Jatropha Genome Database

JcCA0077581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077581.10 + phase: 0 
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g36820.1                                                        81   4e-16
Glyma20g34090.1                                                        77   6e-15
Glyma08g46890.1                                                        75   3e-14

>Glyma18g36820.1 
          Length = 205

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 75/151 (49%), Gaps = 36/151 (23%)

Query: 1   MGKYMKKSKITADVA--VMELSLSHSQSTTLGVRTRAKTLALQRLHXXXXXXXXXXXXXX 58
           MGKYMKKSKI  DVA  +ME    HS    LGVRTRAKTLALQ                 
Sbjct: 1   MGKYMKKSKIAGDVAAVIMEAPPPHSH---LGVRTRAKTLALQNT------------SPD 45

Query: 59  XXXYLQLRSRRLEKHPPPLLNGTKKPEIPQQLASNKKLPKGSSRLSKVKAVAGDFEKVEE 118
              YLQLRSRRL K PP        PE P++ A+       +SRL+K  +      +  E
Sbjct: 46  SSAYLQLRSRRLLKLPP------TPPENPRRSAAET---AANSRLAKTTS-----SRNAE 91

Query: 119 GEGCFDKKCEAEDLGIEASFGENYLEFESRE 149
               FD     +D   E SFGEN+L+ E RE
Sbjct: 92  KFASFD-----DDNNTECSFGENFLDAEPRE 117


>Glyma20g34090.1 
          Length = 224

 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 16/150 (10%)

Query: 1   MGKYMKKSKITADVAVMELSLSHSQSTTLGVRTRAKTLALQRLHXXXXXXXXXXXXXXXX 60
           MGKYMKK+K   ++A++E + S++ ++ +GVRTRAKTLALQ+ H                
Sbjct: 1   MGKYMKKAKPKGELALVESTTSNTTTSYMGVRTRAKTLALQKSH-----AQQHELAATSD 55

Query: 61  XYLQLRSRRLEKHPPPLLNGTKKPEIPQQLASNKKLPKGSSRLSKVKAVAGDFEKVEEGE 120
            YLQLRSRRL+K PP L++  K+P+ P   +   + P+    L+  +    +  K    +
Sbjct: 56  SYLQLRSRRLQK-PPILVHSPKRPKHPNPKSPIPEPPRLG--LASERDATLNHNK----D 108

Query: 121 GCFDKKCEAEDLGIEASFGENYLEFESRER 150
               +  E +    EASFGEN L+FE RER
Sbjct: 109 NTLHENAEPQ----EASFGENVLDFEGRER 134


>Glyma08g46890.1 
          Length = 201

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 1   MGKYMKKSKITADVA--VMELSLSHSQSTTLGVRTRAKTLALQRLHXXXXXXXXXXXXXX 58
           MGKYMKKSKI  DVA  +ME    HS    LGVRTRAKTLALQ                 
Sbjct: 1   MGKYMKKSKIAGDVAAVIMEAPPPHSH---LGVRTRAKTLALQN----------NTTSPD 47

Query: 59  XXXYLQLRSRRLEKHPPPLLNGTKKPEIPQQLASNKKLPKGSSRLSKVKAVAGDFEKVEE 118
              YLQLRSRRL K PP        PE P++ ++       + RL+  + +A  FE    
Sbjct: 48  PSAYLQLRSRRLLKLPP------TPPENPRRSSAETA---ANFRLANAQKLAS-FE---- 93

Query: 119 GEGCFDKKCEAEDLGIEASFGENYLEFESRE 149
                      +D   E SFGEN+L+ E RE
Sbjct: 94  -----------DDNNTECSFGENFLDAEPRE 113