Jatropha Genome Database

JcCA0077401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077401.10 + phase: 0 
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g18880.1                                                       164   2e-41
Glyma09g07680.1                                                       163   4e-41
Glyma17g06010.2                                                       156   4e-39
Glyma17g06010.1                                                       156   4e-39
Glyma13g16680.2                                                       150   4e-37
Glyma13g16680.1                                                       150   4e-37
Glyma16g00620.1                                                       115   1e-26
Glyma07g03960.1                                                       113   4e-26
Glyma10g24750.1                                                        55   2e-08

>Glyma15g18880.1 
          Length = 133

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 88/114 (77%), Gaps = 2/114 (1%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +  S SDKH+DLLRPSAR YS  +GQA+D AD EKG YTL+R PE+FQ G+YDKPLPC+G
Sbjct: 15  LAASVSDKHLDLLRPSARNYSIFRGQAMDVADHEKGNYTLIRGPEDFQTGLYDKPLPCYG 74

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRERXXXXXXXXXVSSLHLFH 114
           CG+GWFSFL GF+ P +WYYATILYFGNYYRKDPRER         V+   LFH
Sbjct: 75  CGIGWFSFLFGFLCPPLWYYATILYFGNYYRKDPRERAGLGASAIAVT--FLFH 126


>Glyma09g07680.1 
          Length = 138

 Score =  163 bits (412), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +  S SDKH+DLLRPSAR YS  +GQA+D AD EKG YTL++ PE+FQ G+YDKPLPC+G
Sbjct: 13  LATSVSDKHLDLLRPSARNYSIFRGQAMDVADHEKGNYTLIKGPEDFQTGLYDKPLPCYG 72

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRER 97
           CG+GWFSFL GF+ P +WYYATILYFGNYYRKDPRER
Sbjct: 73  CGIGWFSFLFGFLCPPLWYYATILYFGNYYRKDPRER 109


>Glyma17g06010.2 
          Length = 144

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 2/97 (2%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +V+S SDKH DLLRPSAR YS  +GQ+ D   R KGKY L+RDPE+FQ+G+YDKPLPCFG
Sbjct: 19  LVRSVSDKHHDLLRPSARNYS--RGQSTDTTGRGKGKYALIRDPEDFQMGVYDKPLPCFG 76

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRER 97
           CG+GWFSFL GF+ P MW+YATILYFGN+YRKDPRER
Sbjct: 77  CGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRER 113


>Glyma17g06010.1 
          Length = 144

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 2/97 (2%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +V+S SDKH DLLRPSAR YS  +GQ+ D   R KGKY L+RDPE+FQ+G+YDKPLPCFG
Sbjct: 19  LVRSVSDKHHDLLRPSARNYS--RGQSTDTTGRGKGKYALIRDPEDFQMGVYDKPLPCFG 76

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRER 97
           CG+GWFSFL GF+ P MW+YATILYFGN+YRKDPRER
Sbjct: 77  CGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRER 113


>Glyma13g16680.2 
          Length = 144

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 81/97 (83%), Gaps = 2/97 (2%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +V+S SDKH DLLRPSAR  + S+GQ+ DAA   KGKY L+RDPE FQ G+YDKPLP FG
Sbjct: 19  LVRSVSDKHHDLLRPSAR--NLSRGQSTDAAGHGKGKYALIRDPEVFQTGVYDKPLPFFG 76

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRER 97
           CG+GWFSFL GF+ P MW+YATILYFGN+YRKDPRER
Sbjct: 77  CGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRER 113


>Glyma13g16680.1 
          Length = 144

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 81/97 (83%), Gaps = 2/97 (2%)

Query: 1   MVKSASDKHIDLLRPSARYYSASKGQALDAADREKGKYTLLRDPEEFQVGMYDKPLPCFG 60
           +V+S SDKH DLLRPSAR  + S+GQ+ DAA   KGKY L+RDPE FQ G+YDKPLP FG
Sbjct: 19  LVRSVSDKHHDLLRPSAR--NLSRGQSTDAAGHGKGKYALIRDPEVFQTGVYDKPLPFFG 76

Query: 61  CGVGWFSFLLGFVFPLMWYYATILYFGNYYRKDPRER 97
           CG+GWFSFL GF+ P MW+YATILYFGN+YRKDPRER
Sbjct: 77  CGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRER 113


>Glyma16g00620.1 
          Length = 119

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 57/70 (81%)

Query: 28 LDAADREKGKYTLLRDPEEFQVGMYDKPLPCFGCGVGWFSFLLGFVFPLMWYYATILYFG 87
          +D AD+ KG+Y   RD E   +G +DKPLPCFGCG+GWFS LLGFV PLMWYYATILYFG
Sbjct: 1  MDTADQRKGEYPPTRDTENPLLGKFDKPLPCFGCGIGWFSLLLGFVCPLMWYYATILYFG 60

Query: 88 NYYRKDPRER 97
          NYY KDPRER
Sbjct: 61 NYYHKDPRER 70


>Glyma07g03960.1 
          Length = 96

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 56/70 (80%)

Query: 28 LDAADREKGKYTLLRDPEEFQVGMYDKPLPCFGCGVGWFSFLLGFVFPLMWYYATILYFG 87
          +D AD+ KGKY   RD E   +G +DKPLPCFGCG+GWFS LLGFV P MWYYATILYFG
Sbjct: 1  MDTADQRKGKYAPTRDTENPLLGKFDKPLPCFGCGIGWFSLLLGFVCPPMWYYATILYFG 60

Query: 88 NYYRKDPRER 97
          NYY KDPRER
Sbjct: 61 NYYHKDPRER 70


>Glyma10g24750.1 
          Length = 50

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 66 FSFLLGFVFPLMWYYATILYFGNYYRKDPRE 96
          F  L GF+ P +WYYATILYFGNYYRKDPRE
Sbjct: 20 FKILFGFLCPPLWYYATILYFGNYYRKDPRE 50