Jatropha Genome Database

JcCA0076441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0076441.10 + phase: 0 
         (219 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13290.1                                                       182   2e-46
Glyma05g30130.1                                                       154   6e-38

>Glyma08g13290.1 
          Length = 474

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/122 (74%), Positives = 98/122 (80%)

Query: 79  RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXX 138
           RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLN+D+ALFTIVVSGT         
Sbjct: 70  RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNEDRALFTIVVSGTDKVLRQVME 129

Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
                       DLS EPQVERELMLIKV+ADP + AE+KWLV+IFRAKIVDIS+HSVTI
Sbjct: 130 QLQKLVNVLKVEDLSREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISQHSVTI 189

Query: 199 EV 200
           EV
Sbjct: 190 EV 191



 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 79  RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
           R HT+S+ V D  G++N + GVFARRGYNI+SLAVG  + + L   T VV GT       
Sbjct: 303 RSHTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRLTTVVPGTDESISKL 362

Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
                         D++  P  ERELMLIK+  +   R ++  +  IFRAK VD+S H++
Sbjct: 363 VQQLYKLVELHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSGHTI 422

Query: 197 TIEV 200
           T+E+
Sbjct: 423 TLEL 426


>Glyma05g30130.1 
          Length = 391

 Score =  154 bits (389), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 84/108 (77%)

Query: 93  MINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXXXXXXXXXXXXXXDL 152
           MINRIAGVFARRGYNIESLAVGLN+D+ALFTIVVSGT                     DL
Sbjct: 1   MINRIAGVFARRGYNIESLAVGLNEDRALFTIVVSGTDKVLRQVMEQLQKLVNVLKVEDL 60

Query: 153 SSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTIEV 200
           S EPQVERELMLIKV+ADP + AE+KWLV+IFRAKIVDISEHSVTIEV
Sbjct: 61  SREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISEHSVTIEV 108



 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 79  RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
           R HT+S+ V D  G++N + GVFARRGYNI+SLAVG  + + L   T VV GT       
Sbjct: 220 RSHTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRLTTVVPGTDESISKL 279

Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
                         D++  P  ERELMLIK+  +   R ++  +  IFRAK VD+S+H++
Sbjct: 280 VQQLYKLVELHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTI 339

Query: 197 TIEV 200
           T+E+
Sbjct: 340 TLEL 343