Jatropha Genome Database

JcCA0075421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075421.20 - phase: 0 /pseudo
         (638 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g37740.1                                                       135   1e-31
Glyma06g02710.1                                                       126   8e-29
Glyma04g02680.1                                                       126   8e-29
Glyma04g02670.1                                                        59   1e-08
Glyma06g02700.1                                                        56   2e-07

>Glyma17g37740.1 
          Length = 592

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 182/385 (47%), Gaps = 42/385 (10%)

Query: 222 GLDQAVKLEISLLDRKPEIALGQSMTIGSQLDQHHTISESKNNGPALWPGLSSTVSTTAS 281
           GL+      IS ++RK ++A      +  +  Q H I E K NG ALWPGLS       +
Sbjct: 202 GLNMPKLSRISQVERKTDVAFEAVRDVDCK-QQQHLIKEQKGNGLALWPGLSPVAPAGQA 260

Query: 282 HGPLSQSCAVKVPAWLGS--RPGFLQNXXXXXXXXX--XXTDRRSWKRCAAHGYISHLIR 337
           +    +S A K P WL +  R   + +               +RSWK+CAAH +ISH+I+
Sbjct: 261 Y---LRSSATKAPDWLEAAIRASKMDSMETSTCSSRGRIFIPKRSWKKCAAHVHISHIIK 317

Query: 338 ALQ---TSDGKESLPVPQNQLRPHEILKQGVLMTINDFNRSRTDLSGITSAASTIVNPVE 394
           +L+   T   KE+     +Q+R HE  K+GVL+ ++  N  +   +GITS   T+ NP  
Sbjct: 318 SLEVPKTQVFKETEFFECHQMREHEGPKRGVLLKVHSSNEMK---NGITS---TVRNP-- 369

Query: 395 KNSNDNKIGILQHLRPHQDNSPAALASGMYTSHK--QSFNFLSLTAGGGGMEPNSSFNGV 452
              +++K  IL+    +++ S AA    +   H+  Q+FNFLSL+AG  G++  +++N +
Sbjct: 370 ---HESKNIILRQQCHYRNISQAAPTPVVQYGHQKQQNFNFLSLSAGSNGLKLENNYNKI 426

Query: 453 GNTLEPLAQLQVPYHAQHPTL---VPFSMSQTRYTS-AYTDXXXXXXXXXXXXXXH-VSS 507
           G+ LEPL++LQVPY      L   +P    Q +Y S +Y D              H   +
Sbjct: 427 GSMLEPLSKLQVPYLQSLAPLHGGIPIPAVQRQYASTSYLDQLSVAGPEVRLQQPHYFGN 486

Query: 508 PYCVPHVSPKAMTKXXXXXXXXXXXXXXYRNNGTSTAT-----TQFPGWQSGRQDSPVLL 562
           P    H       K                  G ST       TQ+P WQSGR DS  L 
Sbjct: 487 PLYGTHYGSTVSHKQQEHQSFWGVQQA---EQGRSTVNFNILRTQYPNWQSGRHDSSALS 543

Query: 563 PC----IP-SPSTLEVVGPKYPRIS 582
           PC    +P SP++ E+ G K   IS
Sbjct: 544 PCAQAILPCSPASQEIFGSKITSIS 568


>Glyma06g02710.1 
          Length = 350

 Score =  126 bits (316), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 153/342 (44%), Gaps = 39/342 (11%)

Query: 318 TDRRSWKRCAAHGYISHLIRALQTSD---GKESLPVPQNQLRPHEILKQGVLMTINDFNR 374
           T ++SWKRCAAH +ISHLIR+L+ S    GKE    PQ  +  H+  K GVL   ++ N 
Sbjct: 27  THKKSWKRCAAHVHISHLIRSLEVSKRQAGKEHELFPQTIV--HQGSKCGVLTKAHNLNW 84

Query: 375 SRTDLSGITSAASTIVNPVEKNSNDNKIGILQHLRPHQDNSPAALASGMYTSHKQSFNFL 434
            R   SG + A  T+ +    NS + K GILQH   H+    A    G+Y   KQ FNFL
Sbjct: 85  MR---SGNSHATQTVYSATTSNSRETKNGILQHDLYHE----APPTPGVYDPQKQCFNFL 137

Query: 435 SLTAG-GGGMEPNSSFNGVGNTLEPLAQLQVPYHAQHPT-------LVPFSMSQTRYTSA 486
           SL+ G    ++ N  FN   + LEP ++ Q+PY             L+P   S   Y S 
Sbjct: 138 SLSTGVSDQLKANEIFNKGESKLEPYSKQQLPYFQSLQLQQQRQHGLMPVQSSP--YAST 195

Query: 487 YTDXXXXXXXXXXXXXXHVSSPYCVP----HVSPKAMTKXXXXXXXXXXXXXXYRNNGT- 541
           + D              H+   Y  P    H S     K                ++   
Sbjct: 196 FLDQLPVAGPQVRLQQQHLPHYYGTPLRGSHYSSTVSYKQQHQSFWAVQLAAQGGSSSVN 255

Query: 542 -STATTQFPGWQSGRQDSPVLLPCIP-SPSTLEVVGPKYPRISXXXXXXXXXXFMAFPLS 599
            S    Q+P WQ+GR DS V    +P SP++LE  G K   IS                S
Sbjct: 256 CSIVRAQYPNWQNGRHDSSVPQVILPHSPASLETFGSKITSIS-------DQHLFTLASS 308

Query: 600 DARAKRQDHHI-SSVYEENGVGFRA--GGGPLPLQLLCNERL 638
            +RA  QD H+ SSV EE+   FR+    G   LQLLC+ER+
Sbjct: 309 RSRANGQDIHLASSVCEESKGRFRSSNNSGTPSLQLLCDERI 350


>Glyma04g02680.1 
          Length = 339

 Score =  126 bits (316), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 156/340 (45%), Gaps = 34/340 (10%)

Query: 318 TDRRSWKRCAAHGYISHLIRALQTSD---GKESLPVPQNQLRPHEILKQGVLMTINDFNR 374
           T ++SWKRCAAH +ISHLIR+L+ S    GKE    PQ   R H+  K GVL   ++ N 
Sbjct: 15  THKKSWKRCAAHVHISHLIRSLEVSKRQVGKEHELCPQT--RVHQGSKCGVLTQAHNLNW 72

Query: 375 SRTDLSGITSAASTIVNPVEKNSNDNKIGILQHLRPHQDNSPAALASGMYTSHKQSFNFL 434
            R   SG + A  T+ +    NS + K GILQH   H + S A    G+Y   KQ  NFL
Sbjct: 73  MR---SGNSHATRTVYSATTSNSRETKNGILQHGLYH-EKSQAPPTPGVYDPQKQCSNFL 128

Query: 435 SLTAGGGGMEPNSSFNGVGNTLEPLAQLQVPYH------AQHPTLVPFSMSQTRYTSAYT 488
           SL+  G  ++ N SFN   + LEP ++ Q+PY        Q   L+P   S   Y S + 
Sbjct: 129 SLSTRGSELKVNESFNKGESKLEPYSKQQLPYFQSLHQQQQQHGLMPIQSS--TYASTFL 186

Query: 489 DXXXXXXXXXXXXXXH-VSSPYCVPHVSPKAMTKXXXXX--XXXXXXXXXYRNNGTSTAT 545
           D              H   +P    H S     K                  +   S   
Sbjct: 187 DQLPVAGPQVRLQQPHYYGTPLRGTHYSSTVSYKQQQQSFWAVQLAAQGGSSSMNCSIVR 246

Query: 546 TQFPGWQSGRQDSP---VLLPCIP--SPSTLEVVGPKYPRISXXXXXXXXXXFMAFPLSD 600
            Q+P WQSGR DS    V+LP  P  + ++LE +G K   IS            +F  S 
Sbjct: 247 AQYPNWQSGRHDSSVAQVILPHSPASASASLETLGSKITSIS-------EQNLFSFASSR 299

Query: 601 ARAKRQDHHI-SSVYEENGVGFRAGGGPLP-LQLLCNERL 638
           +RA  Q  ++ SSV +E+   FR+     P LQLLC+ER+
Sbjct: 300 SRANGQGIYLASSVCDESKGRFRSSNSGTPSLQLLCDERI 339


>Glyma04g02670.1 
          Length = 199

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 21/90 (23%)

Query: 33  VSALNGDFLSLEKTTKERIKKLSAVNRETSSKEENYEMGCDVADREEVLPSQAPSISGSG 92
           ++A  GD    EK+ KE+++ LSAV+       E   MGC V+       S  P+     
Sbjct: 5   LNASRGDLEFSEKSKKEKVRSLSAVD-------EALSMGCRVSH------SHKPT----- 46

Query: 93  ASKRFKLPRKQFFDNCNGVAHVSVPRKLRS 122
             K+FKLPRK F  +CNGV H SVPRK+RS
Sbjct: 47  --KKFKLPRK-FLKDCNGVDHASVPRKIRS 73


>Glyma06g02700.1 
          Length = 248

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 21/85 (24%)

Query: 38  GDFLSLEKTTKERIKKLSAVNRETSSKEENYEMGCDVADREEVLPSQAPSISGSGASKRF 97
           GD    EK+ KE+++ LSAV +  S       MGC V+       SQ P+       K+F
Sbjct: 10  GDLEFSEKSKKEKVRSLSAVAKALS-------MGCRVSH------SQKPT-------KKF 49

Query: 98  KLPRKQFFDNCNGVAHVSVPRKLRS 122
           KLP K F  +CNGV H SVPRK+RS
Sbjct: 50  KLPIK-FLKDCNGVDHASVPRKIRS 73