Jatropha Genome Database

JcCA0075121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075121.10 + phase: 0 /partial
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g30350.1                                                       143   4e-35
Glyma17g24400.1                                                       143   4e-35
Glyma19g29180.2                                                       142   8e-35
Glyma19g29180.1                                                       142   8e-35
Glyma17g23730.1                                                       141   2e-34
Glyma13g15140.1                                                       139   6e-34
Glyma05g10840.1                                                       139   6e-34
Glyma13g15140.2                                                       139   8e-34
Glyma16g04240.3                                                       139   8e-34
Glyma16g04240.1                                                       139   8e-34
Glyma16g04240.2                                                       139   1e-33
Glyma17g20620.1                                                        49   2e-06

>Glyma04g30350.1 
          Length = 799

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 70/74 (94%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
           MASHIVGYPRMGPKRELKFALESFWDGKSSA DL+KVA +LR +IWKQMA AGIKYIPSN
Sbjct: 39  MASHIVGYPRMGPKRELKFALESFWDGKSSADDLQKVAADLRSAIWKQMADAGIKYIPSN 98

Query: 61  TFSYYDQVLDTTAL 74
           TFSYYDQVLDTTA+
Sbjct: 99  TFSYYDQVLDTTAM 112


>Glyma17g24400.1 
          Length = 765

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 70/74 (94%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA DL+KVAF+LR SIWKQM  AGIKYIP+N
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVAFDLRASIWKQMIDAGIKYIPNN 60

Query: 61 TFSYYDQVLDTTAL 74
          TFSYYDQVLDTTA+
Sbjct: 61 TFSYYDQVLDTTAM 74


>Glyma19g29180.2 
          Length = 763

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 70/73 (95%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KVA +LR SIWKQMAGAGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRSSIWKQMAGAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TFS+YDQ+LD TA
Sbjct: 61 TFSFYDQLLDATA 73


>Glyma19g29180.1 
          Length = 763

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 70/73 (95%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KVA +LR SIWKQMAGAGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRSSIWKQMAGAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TFS+YDQ+LD TA
Sbjct: 61 TFSFYDQLLDATA 73


>Glyma17g23730.1 
          Length = 758

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 69/74 (93%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA DL+KVA +LR SIWKQM  AGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVASDLRASIWKQMIDAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTAL 74
          TFSYYDQVLDTTA+
Sbjct: 61 TFSYYDQVLDTTAM 74


>Glyma13g15140.1 
          Length = 803

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 64/74 (86%), Positives = 70/74 (94%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
           MASHIVGYPRMGPKRELKFALESFWDGKSSA++L+KVA +LR +IWKQMA AGIKYIPSN
Sbjct: 39  MASHIVGYPRMGPKRELKFALESFWDGKSSAEELQKVAADLRSAIWKQMADAGIKYIPSN 98

Query: 61  TFSYYDQVLDTTAL 74
           TFS YDQVLDTTA+
Sbjct: 99  TFSLYDQVLDTTAM 112


>Glyma05g10840.1 
          Length = 763

 Score =  139 bits (350), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 64/74 (86%), Positives = 69/74 (93%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFW+GKSSA DL+KVA +LR SIWKQM  AGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWEGKSSADDLQKVAADLRASIWKQMTDAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTAL 74
          TFSYYDQ+LDTTA+
Sbjct: 61 TFSYYDQMLDTTAM 74


>Glyma13g15140.2 
          Length = 627

 Score =  139 bits (350), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 64/74 (86%), Positives = 70/74 (94%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
           MASHIVGYPRMGPKRELKFALESFWDGKSSA++L+KVA +LR +IWKQMA AGIKYIPSN
Sbjct: 39  MASHIVGYPRMGPKRELKFALESFWDGKSSAEELQKVAADLRSAIWKQMADAGIKYIPSN 98

Query: 61  TFSYYDQVLDTTAL 74
           TFS YDQVLDTTA+
Sbjct: 99  TFSLYDQVLDTTAM 112


>Glyma16g04240.3 
          Length = 763

 Score =  139 bits (349), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KV+ +LR SIWKQMA AGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TFS+YDQVLD TA
Sbjct: 61 TFSHYDQVLDATA 73


>Glyma16g04240.1 
          Length = 763

 Score =  139 bits (349), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KV+ +LR SIWKQMA AGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TFS+YDQVLD TA
Sbjct: 61 TFSHYDQVLDATA 73


>Glyma16g04240.2 
          Length = 703

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KV+ +LR SIWKQMA AGIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TFS+YDQVLD TA
Sbjct: 61 TFSHYDQVLDATA 73


>Glyma17g20620.1 
          Length = 354

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 22/26 (84%)

Query: 49 MAGAGIKYIPSNTFSYYDQVLDTTAL 74
          M  AGIKYIPSN FSYYDQVLDTT +
Sbjct: 1  MDDAGIKYIPSNAFSYYDQVLDTTTM 26