Jatropha Genome Database

JcCA0074421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074421.20 - phase: 0 /partial
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36750.1                                                       207   2e-54
Glyma06g46190.1                                                       207   3e-54
Glyma11g08550.2                                                       207   3e-54
Glyma12g32000.1                                                       204   2e-53
Glyma12g10580.1                                                       203   3e-53
Glyma13g38480.1                                                       202   6e-53
Glyma11g08550.1                                                       163   5e-41
Glyma14g27010.1                                                        96   1e-20

>Glyma01g36750.1 
          Length = 901

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 98/112 (87%), Positives = 106/112 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDAD+LGLTG ERY+IDLP++V
Sbjct: 790 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADSLGLTGQERYTIDLPSNV 849

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLIHAKH 131
           +EIRPGQDV V+TD GKSF  TLRFDTEVELAYF+HGGILQYVIRNLI+AKH
Sbjct: 850 NEIRPGQDVTVVTDTGKSFVSTLRFDTEVELAYFNHGGILQYVIRNLINAKH 901


>Glyma06g46190.1 
          Length = 795

 Score =  207 bits (526), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 98/108 (90%), Positives = 102/108 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDADTLGLTGHERYSIDLP+ +
Sbjct: 686 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADTLGLTGHERYSIDLPSKI 745

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEIRPGQDV V TDNGKSFTCT+RFDTEVEL YF+HGGIL YVIRNLI
Sbjct: 746 SEIRPGQDVTVTTDNGKSFTCTVRFDTEVELDYFNHGGILPYVIRNLI 793


>Glyma11g08550.2 
          Length = 901

 Score =  207 bits (526), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 107/112 (95%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK G+DAD+LGLTGHERY+IDLP++V
Sbjct: 790 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGDDADSLGLTGHERYTIDLPSNV 849

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLIHAKH 131
           +EIRPGQDV V+TD GKSF  TLRFDTEVELAYF+HGGILQYVIRN+++AKH
Sbjct: 850 NEIRPGQDVTVVTDAGKSFVSTLRFDTEVELAYFNHGGILQYVIRNMVNAKH 901


>Glyma12g32000.1 
          Length = 984

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 103/108 (95%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGI+PLCFK+GEDADTLGLTGHERY+IDLP+++
Sbjct: 875 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKSGEDADTLGLTGHERYTIDLPSNI 934

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEIRPGQDV V T  GKSFTCT+RFDTEVELAYF+HGGIL YVIRNLI
Sbjct: 935 SEIRPGQDVTVTTTTGKSFTCTVRFDTEVELAYFNHGGILPYVIRNLI 982


>Glyma12g10580.1 
          Length = 984

 Score =  203 bits (517), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 102/108 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDADTLGLTGHERY+I+LP+ +
Sbjct: 875 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADTLGLTGHERYTIELPSII 934

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           +EIRPGQDV V TDNGKSFTCT RFDTEVELAYF+HGGIL YVIRNLI
Sbjct: 935 NEIRPGQDVTVTTDNGKSFTCTARFDTEVELAYFNHGGILPYVIRNLI 982


>Glyma13g38480.1 
          Length = 984

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 94/108 (87%), Positives = 104/108 (96%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGI+PLCFK+GEDADTLGLTGHERY+IDLP+++
Sbjct: 875 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKSGEDADTLGLTGHERYTIDLPSNI 934

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEIRPGQDV V T+ GKSFTCT+RFDTEVELAYF++GGIL YVIRNLI
Sbjct: 935 SEIRPGQDVTVTTNTGKSFTCTVRFDTEVELAYFNNGGILPYVIRNLI 982


>Glyma11g08550.1 
          Length = 901

 Score =  163 bits (412), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/89 (86%), Positives = 84/89 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK G+DAD+LGLTGHERY+IDLP++V
Sbjct: 790 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGDDADSLGLTGHERYTIDLPSNV 849

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEV 108
           +EIRPGQDV V+TD GKSF  TLRFDTEV
Sbjct: 850 NEIRPGQDVTVVTDAGKSFVSTLRFDTEV 878


>Glyma14g27010.1 
          Length = 86

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 15/84 (17%)

Query: 47  MGIIPLCFKTGEDADTLGLTGHERYSIDLPNSVSEIRPGQDVKVLTDNGKSFTCTLRFDT 106
           MGII LCFK GED D+LGLTG E Y+IDLP++V+EIRPGQDV ++TD  KSF  TLRFDT
Sbjct: 1   MGIILLCFKPGEDVDSLGLTGQEGYTIDLPSNVNEIRPGQDVTMVTDTEKSFVSTLRFDT 60

Query: 107 EV---------------ELAYFDH 115
           E                ELAY +H
Sbjct: 61  EAIFYLSSLLVLVVVMFELAYINH 84