Jatropha Genome Database

JcCA0074091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074091.10 - phase: 0 /partial
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g08010.1                                                       222   2e-58
Glyma08g07520.1                                                       209   2e-54

>Glyma13g08010.1 
          Length = 370

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/218 (55%), Positives = 146/218 (66%), Gaps = 21/218 (9%)

Query: 1   MAAAFCNTNLGS------HHGLLFLNAFKRSSQFCH-----TPQQIFGKR---QLEVKRQ 46
           MAA  CN    S      H  +   + F R    CH     + ++ F +R   +L+V+R 
Sbjct: 1   MAATCCNFTQASSSFKKLHENIQLQSYFTR----CHQRSACSVEKDFHRRYGGRLQVERW 56

Query: 47  RQCGQIFCESTSHYTTNANEG---GKEEDIAKVTLVWRAIKLPIYSVALVPLTVGGAAAY 103
            Q   + C      + + NE      EEDI+K TL+WRAIKLPIYSVA VPLTVG AAAY
Sbjct: 57  HQYQHVLCARGVELSPSVNEDVGEESEEDISKETLIWRAIKLPIYSVAFVPLTVGSAAAY 116

Query: 104 LHTGVFSARRYFVLLASSILIITWLNLSNDVYDFDTGADKNKKESVVNLVGSRSGTLFAA 163
           L TG+FSAR YFVLLASS+L+ITWLNLSNDVYDFDTG DKNKKESVVN+VGSR G   AA
Sbjct: 117 LQTGIFSARCYFVLLASSVLVITWLNLSNDVYDFDTGVDKNKKESVVNMVGSRKGIFIAA 176

Query: 164 YLSLALGFLGLTRTSLGAGNVQAILLLACAVICGYIYQ 201
           Y  LALGFLGLT T++   N+++IL L CA+ICGYIYQ
Sbjct: 177 YSCLALGFLGLTWTAVVERNLRSILFLVCAIICGYIYQ 214


>Glyma08g07520.1 
          Length = 332

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/169 (65%), Positives = 127/169 (75%), Gaps = 3/169 (1%)

Query: 36  FGKRQLEVKRQRQCGQIFCESTSHYTTNANEGGKEE---DIAKVTLVWRAIKLPIYSVAL 92
           +G R L+V+   Q   + C      + +ANE   EE   DI+K TL+WRAIKLPIYSVA 
Sbjct: 30  YGGRFLQVEGWHQHQYLLCARGVELSPSANEEVGEETEEDISKETLIWRAIKLPIYSVAF 89

Query: 93  VPLTVGGAAAYLHTGVFSARRYFVLLASSILIITWLNLSNDVYDFDTGADKNKKESVVNL 152
           VPLTVG AA Y  TG+FSAR YFVLLASS+L ITWLNLSNDVYDFDTG DKNKKESVVNL
Sbjct: 90  VPLTVGSAAVYFQTGIFSARCYFVLLASSVLAITWLNLSNDVYDFDTGVDKNKKESVVNL 149

Query: 153 VGSRSGTLFAAYLSLALGFLGLTRTSLGAGNVQAILLLACAVICGYIYQ 201
            GSR GT  AAYL LA+GFLGLT T++   N+++IL L CA+ICGYIYQ
Sbjct: 150 AGSRKGTFIAAYLCLAIGFLGLTWTAVVERNIRSILFLVCAIICGYIYQ 198