Jatropha Genome Database

JcCA0072081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0072081.10 - phase: 0 
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38860.1                                                       228   2e-60
Glyma12g31530.1                                                       228   3e-60
Glyma16g20240.1                                                        77   9e-15
Glyma12g10110.1                                                        58   6e-09

>Glyma13g38860.1 
          Length = 250

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 137/153 (89%)

Query: 28  ERDYLLSQVTAAKEELLSKRRKQLKKDTASKIKSLVDEGKYEKQYEKSEEFQRELKLKVR 87
           ERDY+LSQV +AKEEL +KR+KQLKKDTASK+KSLV+EGKY+KQYE+SEEF++ELK+KVR
Sbjct: 98  ERDYILSQVNSAKEELRAKRKKQLKKDTASKMKSLVEEGKYDKQYEQSEEFRQELKVKVR 157

Query: 88  EILTEQEWRRRKMQMRISXXXXXXXXXXXXQKEMWKRKREHEEQWEGTREQRVSSWRDFM 147
           E+LTEQEWRRRKMQMRIS            QKEMWKRKREHEE+WEGTRE+RVSSWRDFM
Sbjct: 158 ELLTEQEWRRRKMQMRISEEEGRLKRDEEEQKEMWKRKREHEEEWEGTREKRVSSWRDFM 217

Query: 148 KTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 180
           K GKK KKGEIRPPKLKTEDPNKSYVQRPVKRG
Sbjct: 218 KGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG 250


>Glyma12g31530.1 
          Length = 250

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 137/153 (89%)

Query: 28  ERDYLLSQVTAAKEELLSKRRKQLKKDTASKIKSLVDEGKYEKQYEKSEEFQRELKLKVR 87
           ERDY+LSQV +AKEEL +KR+KQLKKDTASK+KSLV+EGKY+KQYE+SEEF++ELK+KVR
Sbjct: 98  ERDYILSQVNSAKEELRAKRKKQLKKDTASKMKSLVEEGKYDKQYEQSEEFRQELKVKVR 157

Query: 88  EILTEQEWRRRKMQMRISXXXXXXXXXXXXQKEMWKRKREHEEQWEGTREQRVSSWRDFM 147
           E+LTEQEWRRRKMQMRIS            QKEMWKRKREHEE+WEGTRE+RVSSWRDFM
Sbjct: 158 ELLTEQEWRRRKMQMRISEEEGRLKRDEEEQKEMWKRKREHEEEWEGTREKRVSSWRDFM 217

Query: 148 KTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 180
           K GKK KKGEIRPPKLKTEDPNKSYVQRPVKRG
Sbjct: 218 KGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG 250


>Glyma16g20240.1 
          Length = 107

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 68/122 (55%), Gaps = 24/122 (19%)

Query: 66  GKYEKQYEKSEEFQRELKLKVREILTEQEWRRRKMQMRISXXXXXXXXXXXXQKEMWKRK 125
           G Y+KQYE+SEEFQ+ELK+KV E+L           M IS               M +  
Sbjct: 1   GIYDKQYEQSEEFQQELKVKVHELLLFN-------VMYISEEEESV--------NMRRNG 45

Query: 126 REHEEQWEGT---------REQRVSSWRDFMKTGKKGKKGEIRPPKLKTEDPNKSYVQRP 176
           +EHE+  +               +S WRDFMK GKK KKGEI P KLKTEDPNKSYVQRP
Sbjct: 46  KEHEKTQQTNLLPFAKADFNSMVLSCWRDFMKGGKKNKKGEIHPLKLKTEDPNKSYVQRP 105

Query: 177 VK 178
           +K
Sbjct: 106 IK 107


>Glyma12g10110.1 
          Length = 97

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 28 ERDYLLSQVTAAKEELLSKRRKQLKKDTASKIKSLVDE 65
          ERDYLLS V +AKEEL +KR+KQLKKDTA KIKSLV+E
Sbjct: 60 ERDYLLSPVNSAKEELRAKRKKQLKKDTAPKIKSLVEE 97