Jatropha Genome Database

JcCA0071981.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071981.20 - phase: 2 /partial
         (283 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45230.1                                                       404   e-113
Glyma18g07440.1                                                       113   3e-25
Glyma13g41490.1                                                        87   2e-17
Glyma15g03900.1                                                        79   8e-15

>Glyma08g45230.1 
          Length = 476

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/285 (69%), Positives = 227/285 (79%), Gaps = 4/285 (1%)

Query: 1   LIIADELDYLITKDRAVLHDLFMLTTFPFSRCILI----GVANAIDLADRFLPRLQSLNC 56
           LI+ADELDYLITKDR VLHDLFMLTTFPFSRCILI    G       +DRFLPRL SLNC
Sbjct: 192 LIVADELDYLITKDRGVLHDLFMLTTFPFSRCILIVNQFGQFKTYCASDRFLPRLTSLNC 251

Query: 57  KPMVVTFRAYSKEQILRILQERLMALPWTTFHPPALELCARKVAAASGDMRKALCVCRSA 116
           KP+VV FRAYSK+QIL+IL+ERL  LP+T F   A+ELCARKVAAASGDMR ALC+C  A
Sbjct: 252 KPIVVNFRAYSKDQILKILEERLNELPYTVFQQQAMELCARKVAAASGDMRNALCICGRA 311

Query: 117 IEILEAELRESTGNLNSFAVDKELSHQQTAPAGEFFEKQDYSIVRIDHMAVALSKAYRSP 176
           IE+LEAE+RES  NLN+   +   S Q  A A +F +K+++  VR DHMA ALSK YRSP
Sbjct: 312 IEMLEAEIRESACNLNTSLEEISSSRQNLATAPDFMKKREFETVRTDHMARALSKTYRSP 371

Query: 177 IVDTIQSLPQHQQIILCAAVKFFRGGKKDTIVGELNKYYIDVCKSTMIPPVGISEFLSMC 236
           +VDTIQSLP HQQI+LC+++K FRG KKDTI+GEL K Y+ VCKS +IPP GI EF +MC
Sbjct: 372 VVDTIQSLPHHQQIVLCSSMKHFRGAKKDTILGELYKSYVGVCKSCIIPPAGILEFSNMC 431

Query: 237 RVLNDQGLLKLGQSRDDKLRRLMLKVDAADIIFALQGVRFFRNCL 281
           RVLNDQGL+KLGQSR+DKLRR+  KVD  DI FALQGVRFF NCL
Sbjct: 432 RVLNDQGLIKLGQSREDKLRRVSPKVDEGDITFALQGVRFFHNCL 476


>Glyma18g07440.1 
          Length = 248

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 54/55 (98%)

Query: 1   LIIADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLQSLN 55
           LI+ADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRL SLN
Sbjct: 193 LIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLN 247


>Glyma13g41490.1 
          Length = 851

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 23/263 (8%)

Query: 11  ITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLQSLNCKPMVVTFRAYSKEQ 70
           +T++++VL+++    T P S+ I+IG+AN +DL ++ LPR+ S       + F  Y+ +Q
Sbjct: 598 VTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISS-RMGIQRLCFGPYNYQQ 656

Query: 71  ILRILQERLMALPWTTFHPPALELCARKVAAASGDMRKALCVCRSAIEILEAELRESTGN 130
           +  I+  RL  +    F   A+E  +RKVAA SGD R+AL +CR A EI +         
Sbjct: 657 LQEIISSRLKGI--DVFEKQAVEFASRKVAAISGDARRALEICRRAAEIAD--------- 705

Query: 131 LNSFAVDKELSHQQTAPAGEFFEKQDYSIVRIDHMAVALSKAYRSPIVDTIQSLPQHQQI 190
              + V K +S+     AG+        +V +  +  A+ + +++P +  ++S  +  +I
Sbjct: 706 ---YRVKKLISNPDCVTAGK-------GLVGMVDVEAAIQEMFQAPHIQMMKSCSRVGKI 755

Query: 191 ILCAAV-KFFRGGKKDTIVGELNKYYIDVCKSTMIPPVGISEFLSMCRVLNDQGLLKLGQ 249
            L A V + +  G  +T   +L       C S      G    L +   L +  ++    
Sbjct: 756 FLTAMVHELYNSGMGETTFEKLAMRVSCFCTSNGEVFPGYDTLLQIGCRLGECRIILCEA 815

Query: 250 SRDDKLRRLMLKVDAADIIFALQ 272
               KL++L L   + D+ FAL+
Sbjct: 816 GAKHKLQKLQLNFPSDDVAFALR 838


>Glyma15g03900.1 
          Length = 796

 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 3/111 (2%)

Query: 11  ITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLQSLNCKPMVVTFRAYSKEQ 70
           +T++++VL+++    T P S+ I+IG+AN +DL ++ LPR+ S       + F  Y+ +Q
Sbjct: 557 VTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISS-RMGIQRLCFGPYNYQQ 615

Query: 71  ILRILQERLMALPWTTFHPPALELCARKVAAASGDMRKALCVCRSAIEILE 121
           +  I+  RL  +    F   A+E  +RKVAA SGD R+AL +CR A EI +
Sbjct: 616 LQEIISSRLKGI--DVFEKQAVEFASRKVAAISGDARRALEICRRAAEIAD 664