Jatropha Genome Database

JcCA0071981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071981.10 + phase: 0 /pseudo/partial
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06630.1                                                       291   4e-79
Glyma02g42260.1                                                       287   6e-78
Glyma02g42260.2                                                       277   6e-75
Glyma11g35060.1                                                       276   1e-74
Glyma18g03300.1                                                       266   2e-71
Glyma18g03290.1                                                       198   4e-51
Glyma11g35070.1                                                       182   3e-46
Glyma03g14530.1                                                        81   9e-16
Glyma11g17090.1                                                        62   5e-10
Glyma09g24800.1                                                        53   3e-07

>Glyma14g06630.1 
          Length = 319

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 139/169 (82%), Positives = 160/169 (94%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           VGAPARVGL+APIDVVVPPG TGLDPS TSFFQ LNIPTKINKG+VEI+T V+LIKKG+K
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ALLAKL IRPFSYGL+V SVYDNGSVFSPEVLDLTEDDL+E+F  GVSMVTSLS
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLS 229

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLEDPSKF 209
           L+IS+PTLAAAPHMF+NAYKNVL+V+V T+Y+FP+A++VKE+L+DPSKF
Sbjct: 230 LAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKF 278


>Glyma02g42260.1 
          Length = 320

 Score =  287 bits (735), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 137/169 (81%), Positives = 159/169 (94%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           VGAPARVGL+APIDVVVPPG TGLDPS TSFFQ LNIPTKINKG+VEI+T V+LI+KG+K
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDK 169

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ALLAKL IRPFSYGL+V SVYDNGSVFSPEVLDLTEDDL+ +F  GVSMVTSLS
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLS 229

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLEDPSKF 209
           L+IS+PTLAAAPHMF+NAYKNVL+V+V T+Y+FP+A++VKE+L+DPSKF
Sbjct: 230 LAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKF 278


>Glyma02g42260.2 
          Length = 273

 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 154/164 (93%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           VGAPARVGL+APIDVVVPPG TGLDPS TSFFQ LNIPTKINKG+VEI+T V+LI+KG+K
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDK 169

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ALLAKL IRPFSYGL+V SVYDNGSVFSPEVLDLTEDDL+ +F  GVSMVTSLS
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLS 229

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLE 204
           L+IS+PTLAAAPHMF+NAYKNVL+V+V T+Y+FP+A++VKE+L+
Sbjct: 230 LAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLK 273


>Glyma11g35060.1 
          Length = 320

 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 155/169 (91%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           V APARVGL+APIDV+VPPG TGLDPS TSFFQ LNIPTKINKG+VEIVT V+LI KG+K
Sbjct: 110 VAAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIVTPVELIMKGDK 169

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ LL+KL IRPFSYGL V SVYDNGSVFSPEVLDLTEDDLV +F  GV MV+SLS
Sbjct: 170 VGSSEAVLLSKLAIRPFSYGLAVVSVYDNGSVFSPEVLDLTEDDLVVKFAEGVCMVSSLS 229

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLEDPSKF 209
           L+IS+P++AAAPHMF+N+YKN+L+V+VATEY+FP+A++VKE+L+DPSKF
Sbjct: 230 LAISYPSIAAAPHMFVNSYKNILAVAVATEYSFPEADKVKEYLKDPSKF 278


>Glyma18g03300.1 
          Length = 317

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/164 (76%), Positives = 151/164 (92%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           V APARVGL+APIDVVVPPG TGLDPS TSFFQ LNIPTKINKG+VEI+T V+LI KG+K
Sbjct: 110 VAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIMKGDK 169

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ALL+KL IRPFSYGL V SVY+NGSVFSPEVLDLTEDDLV +F  GV MV+SLS
Sbjct: 170 VGSSEAALLSKLAIRPFSYGLAVVSVYENGSVFSPEVLDLTEDDLVVKFAEGVCMVSSLS 229

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLE 204
           L+IS+P++AAAPHMF+N+YKN+L+V+VATEY+FP+A++VKE+L+
Sbjct: 230 LAISYPSIAAAPHMFVNSYKNILAVAVATEYSFPEADKVKEYLK 273


>Glyma18g03290.1 
          Length = 275

 Score =  198 bits (504), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 123/164 (75%), Gaps = 25/164 (15%)

Query: 43  APARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEKVG 102
           APARVGL+APIDVVVPPG TGLDPS TSFFQ       INKG+VEI+T V+LIKKG+KVG
Sbjct: 93  APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVNFCNLVINKGTVEIITPVELIKKGDKVG 152

Query: 103 SSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLSLS 162
           SSE+ LL+KL IRPFSYGL+V SVYDNGS FSPEVLDLTEDDL+++F  GVSM       
Sbjct: 153 SSEAVLLSKLAIRPFSYGLVVVSVYDNGSFFSPEVLDLTEDDLIDKFSVGVSM------- 205

Query: 163 ISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLEDP 206
                             NVL+V+VATEY+FP+A++VKE+L+DP
Sbjct: 206 ------------------NVLAVAVATEYSFPEADKVKEYLKDP 231


>Glyma11g35070.1 
          Length = 312

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 93/160 (58%), Positives = 115/160 (71%), Gaps = 11/160 (6%)

Query: 41  VGAPARVGLIAPIDVVVPPGPTGLDPSMTSFFQALNIPTKINKGSVEIVTAVDLIKKGEK 100
           VGAPARVGL+A IDVVVPPG TGLD S TSFFQ  NIPTKINKG+V+I+T  +LIKKG+K
Sbjct: 108 VGAPARVGLVAAIDVVVPPGNTGLDSSQTSFFQVFNIPTKINKGTVQIITHAELIKKGDK 167

Query: 101 VGSSESALLAKLQIRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNGVSMVTSLS 160
           VGSSE+ALL KL IRPF YGL+V SVYDNGS+ +         D            T + 
Sbjct: 168 VGSSEAALLFKLGIRPFCYGLVVVSVYDNGSMTNEVYCWCLHGDF-----------TFVG 216

Query: 161 LSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVK 200
           L+IS+PT+AA+PHMF+NAYKNV +V+V      P+  +++
Sbjct: 217 LAISYPTIAASPHMFVNAYKNVQAVAVQQHIHSPRQTKLR 256


>Glyma03g14530.1 
          Length = 67

 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 47/59 (79%)

Query: 140 LTEDDLVERFVNGVSMVTSLSLSISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQ 198
            TEDDL+E+FV  VSMVTSLSL  S+P L  APHMF+NAYKNVL+V V T Y+ P+A++
Sbjct: 9   FTEDDLIEKFVASVSMVTSLSLVNSYPRLVVAPHMFVNAYKNVLAVVVETNYSLPKADK 67


>Glyma11g17090.1 
          Length = 49

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 37/43 (86%)

Query: 162 SISFPTLAAAPHMFLNAYKNVLSVSVATEYTFPQAEQVKEFLE 204
           +IS+PTL AAPHMF+NAYKNVL+V V  +Y+FP+  +VKE+++
Sbjct: 1   AISYPTLIAAPHMFVNAYKNVLAVVVEIDYSFPETNKVKEYIK 43


>Glyma09g24800.1 
          Length = 180

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 31/39 (79%)

Query: 114 IRPFSYGLIVFSVYDNGSVFSPEVLDLTEDDLVERFVNG 152
           ++  SYG ++  VYD+GS+F PE+LDLTEDDL+E+F  G
Sbjct: 70  LKLLSYGQVILFVYDDGSMFIPELLDLTEDDLIEKFDGG 108