Jatropha Genome Database

JcCA0071791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071791.10 - phase: 0 /pseudo
         (411 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40990.1                                                       239   3e-63
Glyma03g38400.1                                                       196   4e-50

>Glyma19g40990.1 
          Length = 347

 Score =  239 bits (611), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/345 (43%), Positives = 201/345 (58%), Gaps = 30/345 (8%)

Query: 87  MYSEGDIIRSVDLVDPRNGGLSQFFRKVRNLVVRSTTSPEVMLEDCVILTVLLREKATEV 146
           MY+EGDI R+VDL DP +G  SQ  R+V NL+ R  T P++M E CVI+T +L++KA EV
Sbjct: 1   MYNEGDITRTVDLEDPTSGRFSQLVRRVGNLITRPPT-PDIMAEQCVIVTAMLKDKAAEV 59

Query: 147 IK-----------------FYLKVIGHLHALLLXRSFRTCVEHQM------KHLQFXVIY 183
           +K                 F     G   A ++ R    C   Q         L+   + 
Sbjct: 60  VKHLSESHWNSSCIVTMKKFQDMCGGPDEASVMLRYLSGCRTAQYLSVNKKDFLEGVKVS 119

Query: 184 LDSGKHAISRFIRRNXXSLHLIWTTEKLQKQVDVIDQRYEISRKLALASLKSGNKKMALR 243
           L +G  A+S     +   LHLIWTTEKLQ Q+DV D+RYE+ RK ALASL+SGNKK+AL 
Sbjct: 120 LSAG--ALSSITNLDYDVLHLIWTTEKLQLQLDVTDRRYELLRKSALASLQSGNKKLALN 177

Query: 244 HAREMKLASENREKCTSLLNRVDGVLNIIMNAESTKKVTEAIQIGAQAMKQNKITXXXXX 303
           +ARE+KL +++REKC+SLLNRV+ VL++I +AESTKKVTEA+QIGA+A+K+NKI+     
Sbjct: 178 YARELKLVTQSREKCSSLLNRVEEVLSVIADAESTKKVTEAMQIGARAIKENKISVEDVD 237

Query: 304 XXXXXXXXSIDSQKQVEKALESTPSYTGXXXXXXXXXFKKLEVEIGSENLQSHVPRIGVS 363
                   SIDS K+VE ALE  PSY           FKKLE+ +G +   + VP +  +
Sbjct: 238 LCLRDIQESIDSHKEVENALERMPSYVDIEDEDIEEEFKKLELAVGQD---AQVPALEKA 294

Query: 364 SISGERDNWGPSDSLSGAFSNLKLQDASA-RESMNQRTNESKNVT 407
                R     +D +S  FSNLKL D  A +  + Q  +E   +T
Sbjct: 295 FNEEGRMASEAADFISDTFSNLKLSDRPAEKPGITQAVSEGDKIT 339


>Glyma03g38400.1 
          Length = 186

 Score =  196 bits (498), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 112/143 (78%), Gaps = 1/143 (0%)

Query: 6   VREFIKKEVPDWDDEVIATARFKAFSGQRSDWESKYLFWRDLILKVARHLGHLAIRPSQV 65
           +R+FI  EV DWDDEVIA ARFKAFSGQR DWE  +LFW+ LI+K+A H   L IRPSQV
Sbjct: 1   IRDFIANEVSDWDDEVIAFARFKAFSGQRCDWEPTFLFWKHLIIKIATHFRLLLIRPSQV 60

Query: 66  KNEWFNRGGLTPLCLDHVLFIMYSEGDIIRSVDLVDPRNGGLSQFFRKVRNLVVRSTTSP 125
           KN+WFNR GLTPLCLD+VL +MY+EGDI R+VDL DP +G  SQ   +V +L+ RS T P
Sbjct: 61  KNDWFNRRGLTPLCLDNVLSLMYNEGDITRTVDLADPTSGRFSQLVWRVSSLITRSPT-P 119

Query: 126 EVMLEDCVILTVLLREKATEVIK 148
           ++M E CVI+T +L++KA EV++
Sbjct: 120 DIMAEQCVIVTAMLKDKAAEVVR 142