Jatropha Genome Database

JcCA0071331.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071331.20 - phase: 0 /partial
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g42220.1                                                       132   8e-32
Glyma18g12740.1                                                       130   4e-31
Glyma01g03270.1                                                       100   3e-22
Glyma02g04310.1                                                       100   5e-22

>Glyma08g42220.1 
          Length = 320

 Score =  132 bits (332), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 69/76 (90%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPP 60
           KVLAA+GAAKVSAYVTHGVFPN+SWERFT K D   +AFAYFWITDSCPLTVK++AN  P
Sbjct: 245 KVLAANGAAKVSAYVTHGVFPNQSWERFTHKKDALENAFAYFWITDSCPLTVKAVANTAP 304

Query: 61  FEVLSLAGSIADALQI 76
           FEVLSLAGSIA+ALQI
Sbjct: 305 FEVLSLAGSIANALQI 320


>Glyma18g12740.1 
          Length = 320

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 69/76 (90%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPP 60
           +VLAA+GAAKVSAYVTHGVFPN+SWERFT K     +AFAYFWITDSCPLTVK+IANK P
Sbjct: 245 EVLAANGAAKVSAYVTHGVFPNQSWERFTHKKGTLENAFAYFWITDSCPLTVKAIANKAP 304

Query: 61  FEVLSLAGSIADALQI 76
           FEVLSLAGSIA+ALQI
Sbjct: 305 FEVLSLAGSIANALQI 320


>Glyma01g03270.1 
          Length = 408

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLAAHGA K+SAYVTHG+FPN+SW RF   + G   SAF YFWITDSCPLTVK + N+P
Sbjct: 332 KVLAAHGATKISAYVTHGIFPNKSWARFGHDNGGHPESAFTYFWITDSCPLTVKDVMNRP 391

Query: 60  PFE 62
           PFE
Sbjct: 392 PFE 394


>Glyma02g04310.1 
          Length = 408

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLAAHGA K+SAYVTHG+FPN+SW RF   + G   SAF YFWITDSCPLTV+ + N+P
Sbjct: 332 KVLAAHGATKISAYVTHGIFPNKSWARFGHDNGGHPESAFTYFWITDSCPLTVRDVMNRP 391

Query: 60  PFE 62
           PFE
Sbjct: 392 PFE 394