Jatropha Genome Database

JcCA0070381.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0070381.20 - phase: 0 
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02200.1                                                        86   2e-17
Glyma13g22210.1                                                        55   3e-08
Glyma10g08550.2                                                        55   5e-08
Glyma10g08550.1                                                        55   5e-08
Glyma10g11470.1                                                        54   8e-08
Glyma19g38070.1                                                        54   1e-07
Glyma19g38070.3                                                        53   2e-07
Glyma03g35440.1                                                        52   4e-07

>Glyma04g02200.1 
          Length = 372

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 9/118 (7%)

Query: 4   WAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXXXXX 63
           W +LPPE L+ I++  T YVDY +  R+VC+SW +++ K                     
Sbjct: 5   WGELPPELLESISKTLTIYVDY-LRFRSVCRSWRSSVPK--------IPLHLPPQLPWLM 55

Query: 64  XDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVEETPTIFLLNPLTRTRIELP 121
              R F+ +S +KT+ L    +   R CGSSHGWL+M++ETP I LLNPLTR    LP
Sbjct: 56  LSRRAFFDLSLNKTHLLNPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLP 113


>Glyma13g22210.1 
          Length = 443

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%)

Query: 1   MSLWAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXX 60
           +  W+ LP E L++I  + +  +D  V    VCK W++                      
Sbjct: 100 LQTWSDLPTELLELILSRLS--LDDNVRASVVCKRWHSVATS-----VCVVNQSPWLMYF 152

Query: 61  XXXXDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIE 119
               D   FY   + KTY +ELPE    R C +  GWL++    T  +F  NP T+  I+
Sbjct: 153 PKFGDWYEFYDPVHRKTYSIELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTQEIIK 212

Query: 120 LPSYDYRTYKFVAYKLDTSKS 140
           LP ++  +Y+ VA+    + S
Sbjct: 213 LPRFEM-SYQIVAFSCAPTSS 232


>Glyma10g08550.2 
          Length = 376

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 1   MSLWAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXX 60
           +  W+ LP E L++I  + +  +D  V    VCK W++                      
Sbjct: 33  LQTWSDLPTELLELILSRLS--LDDNVRASVVCKRWHSV-----ATSVCVVNQSPWLMYF 85

Query: 61  XXXXDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIE 119
               D   FY  ++ KTY +ELPE    R C +  GWL++    T  +F  NP T   I+
Sbjct: 86  PKFGDWYEFYDPAHRKTYSIELPELRGSRVCYTKDGWLLLYRPRTHRVFFFNPFTMEIIK 145

Query: 120 LPSYDYRTYKFVAY 133
           LP ++  +Y+ VA+
Sbjct: 146 LPRFEM-SYQIVAF 158


>Glyma10g08550.1 
          Length = 376

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 1   MSLWAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXX 60
           +  W+ LP E L++I  + +  +D  V    VCK W++                      
Sbjct: 33  LQTWSDLPTELLELILSRLS--LDDNVRASVVCKRWHSV-----ATSVCVVNQSPWLMYF 85

Query: 61  XXXXDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIE 119
               D   FY  ++ KTY +ELPE    R C +  GWL++    T  +F  NP T   I+
Sbjct: 86  PKFGDWYEFYDPAHRKTYSIELPELRGSRVCYTKDGWLLLYRPRTHRVFFFNPFTMEIIK 145

Query: 120 LPSYDYRTYKFVAY 133
           LP ++  +Y+ VA+
Sbjct: 146 LPRFEM-SYQIVAF 158


>Glyma10g11470.1 
          Length = 368

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 126 RTYKFVAYKLDTSKSIWLELDSLGNRILFLGWNCFHSISSNYEN-SKGNCIYFTDDNF 182
           RT KF  ++LD     W+EL  LG R+LFLG +C  S S+   N  +GNC+ F DD  
Sbjct: 269 RTVKFDVFRLDEEGKKWVELTDLGERVLFLGDDCAFSASAKDLNLGRGNCVAFRDDGL 326


>Glyma19g38070.1 
          Length = 376

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSLWAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXX 60
           M  WA LP E L+ I  +    +   +   AVC+ W++                      
Sbjct: 33  MQSWADLPAELLESILSRLI--LADNIRASAVCRRWHSVASD-----VRVVNQSPWLMYF 85

Query: 61  XXXXDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIE 119
               D   FY     KT+  ELPE    R C +  GWL++    T  +F  NP TR  I+
Sbjct: 86  PKFGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIK 145

Query: 120 LPSYDYRTYKFVAY 133
           LP ++  TY+ VA+
Sbjct: 146 LPRFEM-TYQIVAF 158


>Glyma19g38070.3 
          Length = 344

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSLWAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXX 60
           M  WA LP E L+ I  +    +   +   AVC+ W++                      
Sbjct: 1   MQSWADLPAELLESILSRLI--LADNIRASAVCRRWHSVASD-----VRVVNQSPWLMYF 53

Query: 61  XXXXDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIE 119
               D   FY     KT+  ELPE    R C +  GWL++    T  +F  NP TR  I+
Sbjct: 54  PKFGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIK 113

Query: 120 LPSYDYRTYKFVAY 133
           LP ++  TY+ VA+
Sbjct: 114 LPRFEM-TYQIVAF 126


>Glyma03g35440.1 
          Length = 377

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 9/131 (6%)

Query: 4   WAQLPPEFLQVIAEKHTNYVDYYVCTRAVCKSWYAAIQKRXXXXXXXXXXXXXXXXXXXX 63
           WA LP E L+ I  +    VD  +   +VCK W++                         
Sbjct: 37  WADLPAELLESILSRLI-LVDN-IRASSVCKRWHSVASD-----VRVVNQSPWLMYFPKF 89

Query: 64  XDHRGFYSMSNDKTYRLELPEAFEKRCCGSSHGWLIMVE-ETPTIFLLNPLTRTRIELPS 122
            D   FY     KT   ELPE    R C +  GWL++    T  +F  NP TR  I+LP 
Sbjct: 90  GDCYEFYDPVQHKTLTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPR 149

Query: 123 YDYRTYKFVAY 133
           ++  TY+ VA+
Sbjct: 150 FEM-TYQIVAF 159