Jatropha Genome Database

JcCA0068161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0068161.10 + phase: 0 /pseudo/partial
         (291 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g01930.1                                                       476   e-134
Glyma02g01930.2                                                       474   e-134
Glyma02g01920.1                                                       473   e-134
Glyma10g02040.1                                                       470   e-133
Glyma10g02040.2                                                       470   e-132
Glyma05g21230.1                                                        72   9e-13

>Glyma02g01930.1 
          Length = 465

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/243 (91%), Positives = 236/243 (97%)

Query: 34  AFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGEREQMPEPIIRAFGILKKCAAKVNM 93
           +FREERDTFG IQVPS+KLWGAQTQRSLQNF+IGG RE+MPEPIIRAFG+LKKCAAKVNM
Sbjct: 4   SFREERDTFGAIQVPSEKLWGAQTQRSLQNFDIGGPRERMPEPIIRAFGVLKKCAAKVNM 63

Query: 94  EYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK 153
           EYGLDP++G+AIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK
Sbjct: 64  EYGLDPNVGEAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK 123

Query: 154 RGGKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPNLKNLHTTLHSKSIEFKDIV 213
           RG KFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIP+LK LH TL+SKS+EFKDIV
Sbjct: 124 RGEKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPSLKTLHDTLNSKSVEFKDIV 183

Query: 214 KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGF 273
           KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDR++ TLPRMYQLAQGGTAVGTGLNTKKGF
Sbjct: 184 KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVIDTLPRMYQLAQGGTAVGTGLNTKKGF 243

Query: 274 DVK 276
           D K
Sbjct: 244 DAK 246


>Glyma02g01930.2 
          Length = 420

 Score =  474 bits (1221), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/243 (91%), Positives = 236/243 (97%)

Query: 34  AFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGEREQMPEPIIRAFGILKKCAAKVNM 93
           +FREERDTFG IQVPS+KLWGAQTQRSLQNF+IGG RE+MPEPIIRAFG+LKKCAAKVNM
Sbjct: 4   SFREERDTFGAIQVPSEKLWGAQTQRSLQNFDIGGPRERMPEPIIRAFGVLKKCAAKVNM 63

Query: 94  EYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK 153
           EYGLDP++G+AIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK
Sbjct: 64  EYGLDPNVGEAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK 123

Query: 154 RGGKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPNLKNLHTTLHSKSIEFKDIV 213
           RG KFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIP+LK LH TL+SKS+EFKDIV
Sbjct: 124 RGEKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPSLKTLHDTLNSKSVEFKDIV 183

Query: 214 KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGF 273
           KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDR++ TLPRMYQLAQGGTAVGTGLNTKKGF
Sbjct: 184 KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVIDTLPRMYQLAQGGTAVGTGLNTKKGF 243

Query: 274 DVK 276
           D K
Sbjct: 244 DAK 246


>Glyma02g01920.1 
          Length = 495

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/277 (83%), Positives = 246/277 (88%), Gaps = 2/277 (0%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFASWRLYSTA-FREERDTFGPIQVPSDKLWGAQTQR 59
           MA  V++RRL            LRF S     ++ FREERDTFG IQVPS+KLWGAQTQR
Sbjct: 1   MALYVLSRRLSAGSNSTTLLA-LRFVSSTRSYSSSFREERDTFGAIQVPSEKLWGAQTQR 59

Query: 60  SLQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLND 119
           SLQNF+IGG RE+MPEPIIRAFG+LKKCAAKVNMEYGLDP++GKAIMQAAQEVAEGKLND
Sbjct: 60  SLQNFDIGGPRERMPEPIIRAFGVLKKCAAKVNMEYGLDPAVGKAIMQAAQEVAEGKLND 119

Query: 120 HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVM 179
           HFPLVVWQTGSGTQSNMNANEVIANRAAEIL HKRGGK VHPNDHVNRSQSSNDTFPTVM
Sbjct: 120 HFPLVVWQTGSGTQSNMNANEVIANRAAEILWHKRGGKLVHPNDHVNRSQSSNDTFPTVM 179

Query: 180 HIAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV 239
           HIAAA EINSRLIP+LK LH TL+SKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV
Sbjct: 180 HIAAAMEINSRLIPSLKTLHGTLNSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV 239

Query: 240 KYGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           KYGIDR++ TLP MYQLAQGGTAVGTGLNTKKGFD K
Sbjct: 240 KYGIDRVIGTLPHMYQLAQGGTAVGTGLNTKKGFDAK 276


>Glyma10g02040.1 
          Length = 495

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/276 (83%), Positives = 248/276 (89%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFASWRLYSTAFREERDTFGPIQVPSDKLWGAQTQRS 60
           MA  V++RRL               +S R +S++FREERDTFGPIQVPSDKLWGAQTQRS
Sbjct: 1   MAFYVLSRRLSAGSNSTTLLALRFASSSRSFSSSFREERDTFGPIQVPSDKLWGAQTQRS 60

Query: 61  LQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDH 120
           LQNF+IGG RE+MPEPIIRAFG+LKKCAAKVNMEYGLDP +G+AIMQAAQEVAEGKLN+H
Sbjct: 61  LQNFDIGGPRERMPEPIIRAFGVLKKCAAKVNMEYGLDPIVGEAIMQAAQEVAEGKLNEH 120

Query: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH 180
           FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH
Sbjct: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH 180

Query: 181 IAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240
           IAA  EINSRLIP+LK LH TL+SKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK
Sbjct: 181 IAATMEINSRLIPSLKTLHGTLNSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240

Query: 241 YGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           YGIDR++ TLP +YQLAQGGTAVGTGLNTKKGFD K
Sbjct: 241 YGIDRVIGTLPHLYQLAQGGTAVGTGLNTKKGFDAK 276


>Glyma10g02040.2 
          Length = 490

 Score =  470 bits (1209), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/276 (83%), Positives = 248/276 (89%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFASWRLYSTAFREERDTFGPIQVPSDKLWGAQTQRS 60
           MA  V++RRL               +S R +S++FREERDTFGPIQVPSDKLWGAQTQRS
Sbjct: 1   MAFYVLSRRLSAGSNSTTLLALRFASSSRSFSSSFREERDTFGPIQVPSDKLWGAQTQRS 60

Query: 61  LQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDH 120
           LQNF+IGG RE+MPEPIIRAFG+LKKCAAKVNMEYGLDP +G+AIMQAAQEVAEGKLN+H
Sbjct: 61  LQNFDIGGPRERMPEPIIRAFGVLKKCAAKVNMEYGLDPIVGEAIMQAAQEVAEGKLNEH 120

Query: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH 180
           FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH
Sbjct: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH 180

Query: 181 IAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240
           IAA  EINSRLIP+LK LH TL+SKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK
Sbjct: 181 IAATMEINSRLIPSLKTLHGTLNSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240

Query: 241 YGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           YGIDR++ TLP +YQLAQGGTAVGTGLNTKKGFD K
Sbjct: 241 YGIDRVIGTLPHLYQLAQGGTAVGTGLNTKKGFDAK 276


>Glyma05g21230.1 
          Length = 50

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/35 (88%), Positives = 34/35 (97%)

Query: 206 SIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240
           S+EFKD +KIGRTHTQDATPLTLGQEFSGYTTQV+
Sbjct: 1   SLEFKDFIKIGRTHTQDATPLTLGQEFSGYTTQVE 35