Jatropha Genome Database

JcCA0066671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066671.10 - phase: 2 /partial
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16980.1                                                       127   2e-30
Glyma09g05690.1                                                       125   1e-29
Glyma08g17340.1                                                        80   4e-16

>Glyma15g16980.1 
          Length = 330

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 62/65 (95%)

Query: 1   FFNSHDREFHVASLPYKPDFKVMPEGWDGTIKDLDEVHYEISMKEDEMLYQEFVQKMNFN 60
           FFNSHDREFHVASLPYKPDFKVMPEGWDG  KD+DEVHYEISMKEDEMLY+EFV+KMNFN
Sbjct: 196 FFNSHDREFHVASLPYKPDFKVMPEGWDGITKDVDEVHYEISMKEDEMLYREFVEKMNFN 255

Query: 61  KMKVS 65
           K K++
Sbjct: 256 KKKMA 260


>Glyma09g05690.1 
          Length = 329

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 61/65 (93%)

Query: 1   FFNSHDREFHVASLPYKPDFKVMPEGWDGTIKDLDEVHYEISMKEDEMLYQEFVQKMNFN 60
           FFNSHDREFHVASLPYKPDFKVMPEGWDG  KD+DEVHYEIS KEDEMLY+EFV+KMNFN
Sbjct: 195 FFNSHDREFHVASLPYKPDFKVMPEGWDGITKDVDEVHYEISKKEDEMLYREFVEKMNFN 254

Query: 61  KMKVS 65
           K K++
Sbjct: 255 KKKMA 259


>Glyma08g17340.1 
          Length = 111

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 46/57 (80%)

Query: 1   FFNSHDREFHVASLPYKPDFKVMPEGWDGTIKDLDEVHYEISMKEDEMLYQEFVQKM 57
           FFNSHD EF VASLPY  +FKVMPEG DG  +D+D+ HY+I   EDEMLY+EFV+K+
Sbjct: 54  FFNSHDSEFRVASLPYMLEFKVMPEGCDGINEDVDDGHYDIHKMEDEMLYREFVEKL 110