Jatropha Genome Database

JcCA0066621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066621.10 + phase: 2 /partial
         (58 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g08630.1                                                        91   4e-19
Glyma04g05800.1                                                        89   7e-19
Glyma06g05810.1                                                        88   2e-18
Glyma09g07880.1                                                        62   9e-11
Glyma15g19100.1                                                        61   2e-10

>Glyma09g08630.1 
          Length = 124

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 53/58 (91%), Gaps = 1/58 (1%)

Query: 1   LTAAALTASMVMPDVAEAAELSPSLKNFLLSIVAGGVVLTAIVGAVIGVANFDPVKRS 58
           LTAAA TASM+ PDVAEAA +SPSLKNFLLSI AGGVV+ AI+GAV+GV+NFDPVKRS
Sbjct: 68  LTAAAFTASMMAPDVAEAA-VSPSLKNFLLSIAAGGVVVAAIIGAVVGVSNFDPVKRS 124


>Glyma04g05800.1 
          Length = 123

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/60 (78%), Positives = 53/60 (88%), Gaps = 2/60 (3%)

Query: 1   LTAAALTASMVMPDVAEAA--ELSPSLKNFLLSIVAGGVVLTAIVGAVIGVANFDPVKRS 58
           LTAA++TASMV+P+VA AA  E SPSLKNFLLSI AGGVVL AI GAVIGV+NFDPVKR+
Sbjct: 64  LTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKRT 123


>Glyma06g05810.1 
          Length = 123

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 2/60 (3%)

Query: 1   LTAAALTASMVMPDVAEAA--ELSPSLKNFLLSIVAGGVVLTAIVGAVIGVANFDPVKRS 58
           LTAA++TASMV+P+VA AA  E SPSLKNFLLSI AGG VL AI GAVIGV+NFDPVKR+
Sbjct: 64  LTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKRT 123


>Glyma09g07880.1 
          Length = 119

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 55/58 (94%), Gaps = 1/58 (1%)

Query: 1   LTAAALTASMVMPDVAEAAELSPSLKNFLLSIVAGGVVLTAIVGAVIGVANFDPVKRS 58
           LTAAALTASM++PDVAEAA +SPSLKNFLLSI AGGVV+ AI+GAVIGV+NFDPVKRS
Sbjct: 63  LTAAALTASMMVPDVAEAA-VSPSLKNFLLSIAAGGVVVVAIIGAVIGVSNFDPVKRS 119


>Glyma15g19100.1 
          Length = 119

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 55/58 (94%), Gaps = 1/58 (1%)

Query: 1   LTAAALTASMVMPDVAEAAELSPSLKNFLLSIVAGGVVLTAIVGAVIGVANFDPVKRS 58
           LTAAALTASM++PDVAEAA ++PSLKNFLLSI AGGVV+ AI+GAVIGV+NFDPVKRS
Sbjct: 63  LTAAALTASMMVPDVAEAA-VTPSLKNFLLSIAAGGVVVVAIIGAVIGVSNFDPVKRS 119